Miyakogusa Predicted Gene

Lj1g3v4538890.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4538890.1 tr|G7KZK3|G7KZK3_MEDTR CLIP-associating protein
OS=Medicago truncatula GN=MTR_7g099480 PE=4 SV=1,85.66,0,ARM
repeat,Armadillo-type fold; no description,Armadillo-like helical;
CLASP_N,CLASP N-terminal doma,CUFF.32613.1
         (1513 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80963 similar to UniRef100_A7Q1F1 Cluster: Chromosome...   307   1e-82
gnl|LJGI|TC81438 similar to UniRef100_A7Q1F1 Cluster: Chromosome...   111   1e-23

>gnl|LJGI|TC80963 similar to UniRef100_A7Q1F1 Cluster: Chromosome chr7 scaffold_44,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_44, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (6%)
          Length = 721

 Score =  307 bits (155), Expect = 1e-82
 Identities = 534/659 (81%), Gaps = 6/659 (0%)
 Strand = Plus / Plus

                                                                        
Query: 827  attttattcttagtttgtcagttgaagaacaaaattctttgagacgagcccttaaacaat 886
            ||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||  
Sbjct: 6    attttattcttagtttgtcagttgatgtacaaaattctctgagacgagcccttaaacagc 65

                                                                        
Query: 887  acacccctcgcattgaagtagacctaatgaactatctgcagagcaagaaagagagacagc 946
             ||||||||| || ||||||||  |||||||||||||||||| |||||||||| ||   |
Sbjct: 66   gcacccctcgtatagaagtagatttaatgaactatctgcagaacaagaaagagcga---c 122

                                                                        
Query: 947  gttctaaggcttcctatgatccatctgatgttgtgggaacatcctctgacgatggacatg 1006
            |||||||| |||| |||||||||||||||||| |||||||||| ||||| || ||  |||
Sbjct: 123  gttctaagtcttcgtatgatccatctgatgttatgggaacatcttctgatgagggttatg 182

                                                                        
Query: 1007 ttggtttctcccggaaagctcattaccttggaaggtattccgttggttcccttgacagtg 1066
             ||| || ||  |||||  ||||||| ||||||||||||| | |||||| || || ||||
Sbjct: 183  ctggattgtctaggaaaaatcattacattggaaggtattctgctggttctctagatagtg 242

                                                                        
Query: 1067 atggtggcaggaagtggagttcccaagattcaatgctgatgaaagccagtcttggtcaag 1126
            |||||||||||||||||||||||||||||||||  ||||| ||| ||||| |||| | | 
Sbjct: 243  atggtggcaggaagtggagttcccaagattcaaccctgattaaaaccagttttggccgac 302

                                                                        
Query: 1127 catcttctattgaaactcaggaacatcctaaccataatattgaggctgatgctaatagtg 1186
            || |||||  ||||||| |||||||  |  | || ||| || || ||||| |||||||||
Sbjct: 303  cagcttctgatgaaactgaggaacaatcatatcagaatcttcagactgattctaatagtg 362

                                                                        
Query: 1187 gttgtcatggttcaaaaactgaagatcttgcttattctgtctatccaaggggtcaaaact 1246
             |  || ||||||||||||| ||||   ||||||  |  || || ||  || |||||| |
Sbjct: 363  ttattcttggttcaaaaactaaagactctgcttacacaatcaattcagtggatcaaaatt 422

                                                                        
Query: 1247 ttagtgctcaaactagccaacttggacatgtggacagtagcatgaactttgagggtcttt 1306
            || |   |||||||||||||||||||||||||||||||| |||||||||||| ||||| |
Sbjct: 423  ttggctttcaaactagccaacttggacatgtggacagtaacatgaactttgaaggtctgt 482

                                                                        
Query: 1307 caactcctcgtctagatgttaacagtgtgatgtcattagatcatttaaatgcttctgaag 1366
            ||    ||  ||| |||| |||  || ||||||||||||| ||||||||   | ||||||
Sbjct: 483  ca---tctgatctggatgctaatggtctgatgtcattagagcatttaaaccttgctgaag 539

                                                                        
Query: 1367 gttatgtacatgataaagaacatccttctgaagtggaacttaatcatcattcagttgaag 1426
            | | |  |||||| ||||||  ||||| |||| || | | |||||||||  |   |||||
Sbjct: 540  gatttagacatgacaaagaatttccttttgaattgaaccataatcatcacaccactgaag 599

                                                                       
Query: 1427 ctgtaaatattaactccatggtagacacaggacccagcattcctcaaattcttcatatg 1485
             ||||||  || ||||||||  |||||| |||| ||||||| |||||||||||||||||
Sbjct: 600  atgtaaaggttgactccatgacagacactggactcagcatttctcaaattcttcatatg 658


>gnl|LJGI|TC81438 similar to UniRef100_A7Q1F1 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 779

 Score =  111 bits (56), Expect = 1e-23
 Identities = 90/100 (90%), Gaps = 1/100 (1%)
 Strand = Plus / Plus

                                                                       
Query: 39  ttatagagatgggaactttagggattcacataatagttacgtgcctaattttcagaggcc 98
           |||||||||||| ||||||||||||||||  |||||||||||||| ||||||||||||||
Sbjct: 602 ttatagagatggcaactttagggattcaccgaatagttacgtgccaaattttcagaggcc 661

                                                   
Query: 99  tctattgagaaagaatgtagctggacgtatgtctgctggc 138
            ||||| ||||| ||||| |||| |||| |||||||||||
Sbjct: 662 gctattaagaaa-aatgttgctgcacgtgtgtctgctggc 700