Miyakogusa Predicted Gene
- Lj1g3v4528670.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4528670.1 tr|F2D5C1|F2D5C1_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,51.09,7e-19,seg,NULL;
PfkB,PfkB; SUBFAMILY NOT NAMED,NULL; SUGAR KINASE,NULL; no
description,NULL; Ribokinase-li,CUFF.32585.1
(828 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP067421 similar to UniRef100_A7Q1H4 Cluster: Chromosom... 430 e-120
gnl|LJGI|BW599474 similar to UniRef100_A7Q1H4 Cluster: Chromosom... 309 1e-83
gnl|LJGI|AV422745 similar to UniRef100_A7Q1H4 Cluster: Chromosom... 129 3e-29
gnl|LJGI|TC70453 similar to UniRef100_A7Q1H4 Cluster: Chromosome... 119 3e-26
gnl|LJGI|TC82716 similar to UniRef100_A7Q1H4 Cluster: Chromosome... 68 9e-11
gnl|LJGI|TC61250 weakly similar to UniRef100_Q6Z1P3 Cluster: Pfk... 60 2e-08
>gnl|LJGI|BP067421 similar to UniRef100_A7Q1H4 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 409
Score = 430 bits (217), Expect = e-120
Identities = 244/253 (96%)
Strand = Plus / Minus
Query: 573 aggtataggatcactttttggtcagttatacgttggaacagctgagaacataccaccatc 632
|||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 409 aggtataggatccctttttggtcagttatacggtggaaccgctgagaacatacccccatc 350
Query: 633 agagcttatcgacactaccggtgctggagacgcatttgctggagctattctttatgctat 692
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 349 agagcttatcgaccctaccggtgctggagacgcctttgctggagctattctttatgctat 290
Query: 693 ctgtgccaactttactagagagaaaatgctatgctttgctgctaatgtggcagctgccaa 752
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 289 ctgtgcccactttactagagagaaaatgctatgctttgctgctaatgtggcagctgccca 230
Query: 753 atgcagagctctaggagcaagaactggtcttcctcaccacacagacccgcgcctagcacc 812
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 atgcagagctctaggagccagaactggtcttcctcaccacacagacccgcgcctagcacc 170
Query: 813 cttcatatcatgc 825
|||||||||||||
Sbjct: 169 cttcatatcatgc 157
>gnl|LJGI|BW599474 similar to UniRef100_A7Q1H4 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 184
Score = 309 bits (156), Expect = 1e-83
Identities = 171/176 (97%), Gaps = 5/176 (2%)
Strand = Plus / Plus
Query: 61 aagtcccgtacttgtatacataccccaggatttcctccattgaagccagttgaacttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 aagtcccgtacttgtatacataccccaggatttcctccattgaagccagttgaacttcct 68
Query: 121 gaatcaagtttgttatctgcattggatggagcaagaattgtttatactgatgggagatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gaatcaagtttgttatctgcattggatggagcaagaattgtttatactgatgggagatta 128
Query: 181 catgaaactgctctagttgtagcaaacg-----aggcagttaagaagaacatacct 231
|||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 129 catgaaactgctctagttgtagcaaacgagtacaggcagttaagaagaacatacct 184
>gnl|LJGI|AV422745 similar to UniRef100_A7Q1H4 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 440
Score = 129 bits (65), Expect = 3e-29
Identities = 146/173 (84%)
Strand = Plus / Plus
Query: 4 gtggtatctaaggaaggcacttcaccctttacctatatcattgtagacagccaaactaag 63
|||||||||||||| || |||||||| ||||| ||||| ||||| |||| | |||| |||
Sbjct: 262 gtggtatctaaggagggaacttcaccatttacatatattattgtggacaacgaaacgaag 321
Query: 64 tcccgtacttgtatacataccccaggatttcctccattgaagccagttgaacttcctgaa 123
| || || ||||||||||| ||||||| ||||||| ||| |||| ||| ||||| |||
Sbjct: 322 actcgcacatgtatacatactccaggatatcctccaatgataccagatgatcttccagaa 381
Query: 124 tcaagtttgttatctgcattggatggagcaagaattgtttatactgatgggag 176
||||||||| |||||||||||||||||||||| || || ||| |||||||||
Sbjct: 382 tcaagtttgctatctgcattggatggagcaagcatggtatattttgatgggag 434
>gnl|LJGI|TC70453 similar to UniRef100_A7Q1H4 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 599
Score = 119 bits (60), Expect = 3e-26
Identities = 174/212 (82%)
Strand = Plus / Plus
Query: 604 gttggaacagctgagaacataccaccatcagagcttatcgacactaccggtgctggagac 663
|||||||||||||||| ||| ||| ||||||||||||| || || || |||||||| ||
Sbjct: 85 gttggaacagctgagagcattccatcatcagagcttattgatacgactggtgctggggat 144
Query: 664 gcatttgctggagctattctttatgctatctgtgccaactttactagagagaaaatgcta 723
|||||| ||||||| || ||||||||||||| | || ||| | ||||| ||||||
Sbjct: 145 gcatttattggagctgttatttatgctatctgctcaaagttttcaccagagaccatgcta 204
Query: 724 tgctttgctgctaatgtggcagctgccaaatgcagagctctaggagcaagaactggtctt 783
| ||||||||| |||||||||| ||| || ||| ||| |||||||||||||| ||||||
Sbjct: 205 tcctttgctgcaaatgtggcaggtgctaagtgccgagatctaggagcaagaagcggtctt 264
Query: 784 cctcaccacacagacccgcgcctagcaccctt 815
||| ||| |||||||| ||| ||||| ||||
Sbjct: 265 ccttaccgtacagacccacgcttagcatcctt 296
>gnl|LJGI|TC82716 similar to UniRef100_A7Q1H4 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1314
Score = 67.9 bits (34), Expect = 9e-11
Identities = 127/158 (80%)
Strand = Plus / Plus
Query: 628 ccatcagagcttatcgacactaccggtgctggagacgcatttgctggagctattctttat 687
|||||||||||||| || || || ||||| || || |||||| |||||| || | |||
Sbjct: 950 ccatcagagcttattgatacaactggtgccggggatgcatttatcggagctgttttatat 1009
Query: 688 gctatctgtgccaactttactagagagaaaatgctatgctttgctgctaatgtggcagct 747
|| |||||||||||||| | |||||||||| | |||||| || |||||||||||
Sbjct: 1010 gcaatctgtgccaacttctcaccagagaaaatgttgccatttgcttcttatgtggcagct 1069
Query: 748 gccaaatgcagagctctaggagcaagaactggtcttcc 785
|||||||| |||||||| || || || |||||||||||
Sbjct: 1070 gccaaatgtagagctcttggtgctaggactggtcttcc 1107
>gnl|LJGI|TC61250 weakly similar to UniRef100_Q6Z1P3 Cluster: PfkB type carbohydrate
kinase protein family-like; n=1; Oryza sativa Japonica
Group|Rep: PfkB type carbohydrate kinase protein
family-like - Oryza sativa subsp. japonica (Rice),
partial (30%)
Length = 754
Score = 60.0 bits (30), Expect = 2e-08
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 605 ttggaacagctgagaacataccaccatcagagcttatcgacactaccggtgctggagacg 664
|||||||||| ||||| |||||| || ||||| | ||||| || ||||||||||| |
Sbjct: 196 ttggaacagcagagaagataccagattctgagctggtggacacaactggtgctggagatg 255
Query: 665 catttgctggagctattctttatgctatctgtgccaac 702
||||| |||||| ||| ||||||||||||| ||||||
Sbjct: 256 catttattggagccattatttatgctatctgcgccaac 293