Miyakogusa Predicted Gene

Lj1g3v4528640.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4528640.1 tr|Q9C9B5|Q9C9B5_ARATH At1g73940/F2P9_19
OS=Arabidopsis thaliana GN=F2P9.19 PE=2 SV=1,37.07,9e-18,
,CUFF.32583.1
         (381 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70252 similar to UniRef100_A7QE76 Cluster: Chromosome...   755   0.0  
gnl|LJGI|BW598545 similar to UniRef100_A7BN01 Cluster: 3-dehydro...    50   1e-05

>gnl|LJGI|TC70252 similar to UniRef100_A7QE76 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (83%)
          Length = 791

 Score =  755 bits (381), Expect = 0.0
 Identities = 381/381 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtttggcacggcgattagatgtttagcgaagaagtcaaagccgaagatgggacccata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atgtttggcacggcgattagatgtttagcgaagaagtcaaagccgaagatgggacccata 226

                                                                       
Query: 61  gtgatgaaaacaccgccggagcagagggcaacaatcacaagggtcctctttgatatcgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gtgatgaaaacaccgccggagcagagggcaacaatcacaagggtcctctttgatatcgtg 286

                                                                       
Query: 121 aaggagcatggtcccatcagcgttcccaacacctgggagcgtgtcaaggaagttggcttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aaggagcatggtcccatcagcgttcccaacacctgggagcgtgtcaaggaagttggcttg 346

                                                                       
Query: 181 aaagatttgaagagcaagaatcatatgaaaatagtgttgagatggatgagagagagacaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aaagatttgaagagcaagaatcatatgaaaatagtgttgagatggatgagagagagacaa 406

                                                                       
Query: 241 aagcttcgtcttgtttgcaaccatgttggggctcataagcagttcctttatacaacttgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aagcttcgtcttgtttgcaaccatgttggggctcataagcagttcctttatacaacttgg 466

                                                                       
Query: 301 tttaccaatcccggtacagctcaggcaacaccaggaggaagcgttccttcaaagcagaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tttaccaatcccggtacagctcaggcaacaccaggaggaagcgttccttcaaagcagaag 526

                                
Query: 361 tcccctttaaggacttgaagt 381
           |||||||||||||||||||||
Sbjct: 527 tcccctttaaggacttgaagt 547


>gnl|LJGI|BW598545 similar to UniRef100_A7BN01 Cluster: 3-dehydroquinate dehydratase /
           shikimate 5-dehydrogenase; n=1; Beggiatoa sp. SS|Rep:
           3-dehydroquinate dehydratase / shikimate 5-dehydrogenase
           - Beggiatoa sp. SS, partial (6%)
          Length = 470

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 302 ttaccaatcccggtacagctcaggc 326
           |||||||||||||||||||||||||
Sbjct: 446 ttaccaatcccggtacagctcaggc 470