Miyakogusa Predicted Gene
- Lj1g3v4528600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4528600.1 Non Chatacterized Hit- tr|H2W188|H2W188_CAEJA
Uncharacterized protein OS=Caenorhabditis japonica
GN=,28.69,2e-18,seg,NULL; Short conserved domain in transcriptional
re,Plus-3 domain, subgroup; SUBFAMILY NOT NAMED,,CUFF.32581.1
(1919 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79107 similar to UniRef100_A7QYP4 Cluster: Chromosome... 1439 0.0
gnl|LJGI|TC79973 similar to UniRef100_A7QYP4 Cluster: Chromosome... 618 e-176
gnl|LJGI|AU251519 similar to UniRef100_Q8RWR3 Cluster: At1g61040... 153 5e-36
gnl|LJGI|BP036757 similar to UniRef100_Q8RWR3 Cluster: At1g61040... 74 4e-12
>gnl|LJGI|TC79107 similar to UniRef100_A7QYP4 Cluster: Chromosome undetermined
scaffold_252, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_252, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(23%)
Length = 854
Score = 1439 bits (726), Expect = 0.0
Identities = 744/750 (99%)
Strand = Plus / Plus
Query: 1170 tactgtgaagcagatgttacaagagaaaaaatctgcctcatcgagacggataaatgttgc 1229
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tactgtgaagcaaatgttacaagagaaaaaatctgcctcatcgagacggataaatgttgc 61
Query: 1230 agccgagaaggatcggttgaggtgggaaatggaattagcacaaagtaagcatgatgaagc 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agccgagaaggatcggttgaggtgggaaatggaattagcacaaagtaagcatgatgaagc 121
Query: 1290 tgcagtggagaggatcaagacaagactggaagaattggaggcgtcccggaaagctcagga 1349
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgcggtggagaggatcaagacaagactggaagaattggaggcgtcccggaaagctcagga 181
Query: 1350 gaaggatgccaaggctttaaggctttctgaaatgaacagaaagaacaggtttgagaactt 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaaggatgccaaggctttaaggctttctgaaatgaacagaaagaacaggtttgagaactt 241
Query: 1410 caaaaatgcttctcaattgaagcgagcaaacatggatttgaaagcaggggaggcaggtta 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caaaaatgcttctcaattgaagcgagcaaacatggatttgaaagcaggggaggcaggtta 301
Query: 1470 tgatcctttttcaaggagatggactagatcaaggaactactatgtttcaaaacctggtga 1529
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgaccctttttcaaggagatggactagatcaaggaactactatgtttcaaaacctggtga 361
Query: 1530 agaagctgcagctgggagtactattgctgatgccgctgcagtggctgataccggaagcaa 1589
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 362 agaagctgcagctgggagtactattgctgatgccgctgcagtgggtgataccggaagcaa 421
Query: 1590 ggggacaaaagcagcagtggtagtggagactggcatggtggctactgctgcagctttgga 1649
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 422 ggggacaaaagcagcagtggtagtggagactggcatggtggctactggtgcagctttgga 481
Query: 1650 agctgctgctgatgctgggaagttggtagacacaagcgctccggtggatcaagggacaga 1709
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 482 agctgctgctgatgctgggaagttggtagacacaagcgttccggtggatcaagggacaga 541
Query: 1710 gtcaaatgagctgcacaattttgagctgccaatatcattatccgcactccaaaagtttgg 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gtcaaatgagctgcacaattttgagctgccaatatcattatccgcactccaaaagtttgg 601
Query: 1770 tggtgccaaaggagtttatgcagcatttatggccagaaaacaaagaattgaagcagttgc 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tggtgccaaaggagtttatgcagcatttatggccagaaaacaaagaattgaagcagttgc 661
Query: 1830 tggacttcaagtcccagaaaatgatggcaaggtgcatccgctgacattaacagttagtga 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tggacttcaagtcccagaaaatgatggcaaggtgcatccgctgacattaacagttagtga 721
Query: 1890 ttacaagagaagaagagggcttctttgaaa 1919
||||||||||||||||||||||||||||||
Sbjct: 722 ttacaagagaagaagagggcttctttgaaa 751
>gnl|LJGI|TC79973 similar to UniRef100_A7QYP4 Cluster: Chromosome undetermined
scaffold_252, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_252, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(39%)
Length = 1365
Score = 618 bits (312), Expect = e-176
Identities = 657/772 (85%)
Strand = Plus / Plus
Query: 758 aggatatcaaggaaatcaccattcctaggtcgaagcttgcaaaatggttcatggagcctt 817
||||||| |||||||| || |||| ||||| || ||||| |||||||| ||||||||||
Sbjct: 54 aggatataaaggaaataactattcgcaggtccaaacttgccaaatggtttatggagcctt 113
Query: 818 tctttgaggagttgattgttggttgttttgtgagagttggtattggtaggtccaaatccg 877
||||||||||||| || |||||||| || || |||||||| ||||||||||| ||||| |
Sbjct: 114 tctttgaggagttaatagttggttgcttcgtaagagttggaattggtaggtcaaaatctg 173
Query: 878 ggcctatctacaggctctgcatggtgaaaaatgttgatgcctcggatcctgaccggctgt 937
| ||||||||| ||||||||||||||||||||||||||||||| |||||||| |||| ||
Sbjct: 174 gacctatctaccggctctgcatggtgaaaaatgttgatgcctcagatcctgatcggcagt 233
Query: 938 ataaatttgagaataggagtacatacaagtacttgaatgttgtctggggaaatgaaactt 997
|||| || ||||||| | |||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 234 ataagttagagaataaaattacatacaagtatttgaatgttgtctggggaaatgaaagtt 293
Query: 998 ctgctgcaaggtggcaaatggctatggttagcgattctgctccgcacgaggaggagttta 1057
||||||| |||||||||||||||||| ||||||| |||||||| | || |||||||| |
Sbjct: 294 ctgctgctaggtggcaaatggctatgattagcgactctgctccacttgaagaggagttca 353
Query: 1058 agcagtgggttaaggaagtagagcgaagtggtggacacatgctgatgaagaaagatgtgc 1117
| |||||||||||||||||||||||||||||||| | |||| | || ||||||||
Sbjct: 354 aacagtgggttaaggaagtagagcgaagtggtggccgtatgccaagcaaacaagatgtgt 413
Query: 1118 tggagaaaaaacaagatattcaaaagatcaactcatttgtttactcagcagctactgtga 1177
|||| |||||||||| || ||||| || | ||||||| |||||||| ||||||||||
Sbjct: 414 tggaaaaaaaacaagcaatacaaaaagccatcacatttgtctactcagcggctactgtga 473
Query: 1178 agcagatgttacaagagaaaaaatctgcctcatcgagacggataaatgttgcagccgaga 1237
|||||||||||||||||||||| || ||||| || | | |||||||||| || ||||
Sbjct: 474 agcagatgttacaagagaaaaagtccgcctcgtcacggccattaaatgttgctgctgaga 533
Query: 1238 aggatcggttgaggtgggaaatggaattagcacaaagtaagcatgatgaagctgcagtgg 1297
||||| || ||||| ||||||||||| ||||| ||||||| ||||||| | | |||||
Sbjct: 534 aggataggctgaggagggaaatggaaatagcaataagtaagaatgatgagtcagaagtgg 593
Query: 1298 agaggatcaagacaagactggaagaattggaggcgtcccggaaagctcaggagaaggatg 1357
|||||||||| || ||||| ||| || ||||| ||| || ||| ||| ||||||||
Sbjct: 594 agaggatcaaagcacgactgatagagttagaggcctccaggcaagaaaaggtgaaggatg 653
Query: 1358 ccaaggctttaaggctttctgaaatgaacagaaagaacaggtttgagaacttcaaaaatg 1417
| |||||||| | ||| |||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 654 ctaaggctttgaagctggctgagatgaaccgaaagaacaggtttgagaacttcaaaaatg 713
Query: 1418 cttctcaattgaagcgagcaaacatggatttgaaagcaggggaggcaggttatgatcctt 1477
||||| || |||||| || || | | |||||||||||||||||||||||||||||| |
Sbjct: 714 cttctgaaatgaagccagtgaatacaggtttgaaagcaggggaggcaggttatgatccct 773
Query: 1478 tttcaaggagatggactagatcaaggaactactatgtttcaaaacctggtga 1529
| |||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 774 tctcaaggagatggactagatcaatgaattactatgtttcaaaacctggtga 825
Score = 170 bits (86), Expect = 2e-41
Identities = 251/306 (82%)
Strand = Plus / Plus
Query: 1614 ggagactggcatggtggctactgctgcagctttggaagctgctgctgatgctgggaagtt 1673
|||| |||||||||||||||||| |||||| |||||||| |||||||||||||| |||||
Sbjct: 901 ggaggctggcatggtggctactgttgcagccttggaagccgctgctgatgctggaaagtt 960
Query: 1674 ggtagacacaagcgctccggtggatcaagggacagagtcaaatgagctgcacaattttga 1733
|| || ||||| ||||| ||||| |||||||||||||| || |||||||||||||
Sbjct: 961 agtggatacaagtgctccagtggaccaagggacagagtcgtattcattgcacaattttga 1020
Query: 1734 gctgccaatatcattatccgcactccaaaagtttggtggtgccaaaggagtttatgcagc 1793
|||||| || || ||| | ||| |||||||| || || ||| |||||| | | ||||
Sbjct: 1021 gctgccgatttccttagcattacttcaaaagttcggcggagcccaaggagctcaggcagg 1080
Query: 1794 atttatggccagaaaacaaagaattgaagcagttgctggacttcaagtcccagaaaatga 1853
||||||||| |||||||||| ||| |||||| | |||| || ||||| || |||||
Sbjct: 1081 atttatggcaagaaaacaaaaaatagaagcaacagttggatttaaagtcttggagaatga 1140
Query: 1854 tggcaaggtgcatccgctgacattaacagttagtgattacaagagaagaagagggcttct 1913
||||| | |||| ||||||| | ||||||||||||||||| |||||||||||||||||
Sbjct: 1141 tggcaggaggcatgcgctgacgctgacagttagtgattacaaaagaagaagagggcttct 1200
Query: 1914 ttgaaa 1919
|||||
Sbjct: 1201 ctgaaa 1206
>gnl|LJGI|AU251519 similar to UniRef100_Q8RWR3 Cluster: At1g61040/T7P1_17; n=1;
Arabidopsis thaliana|Rep: At1g61040/T7P1_17 -
Arabidopsis thaliana (Mouse-ear cress), partial (6%)
Length = 386
Score = 153 bits (77), Expect = 5e-36
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 138 gcggagttatcgggccggaaagcactcggccatgcaggttcctttgaaaaagagattgga 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcggagttatcgggccggaaagcactcggccatgcaggttcctttgaaaaagagattgga 369
Query: 198 tttgactgagagagatg 214
|||||||||||||||||
Sbjct: 370 tttgactgagagagatg 386
Score = 151 bits (76), Expect = 2e-35
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 atggcggatttggaaaatttgcttctcgaggctgcggggaggaaccggcactctctcccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atggcggatttggaaaatttgcttctcgaggctgcggggaggaaccggcactctctcccg 232
Query: 61 ccttcgaggcgaggcg 76
||||||||||||||||
Sbjct: 233 ccttcgaggcgaggcg 248
>gnl|LJGI|BP036757 similar to UniRef100_Q8RWR3 Cluster: At1g61040/T7P1_17; n=1;
Arabidopsis thaliana|Rep: At1g61040/T7P1_17 - Arabidopsis
thaliana (Mouse-ear cress), partial (7%)
Length = 264
Score = 73.8 bits (37), Expect = 4e-12
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 996 ttctgctgcaaggtggcaaatggctatggttagcgattctgctccgcacgaggaggagtt 1055
||||||||| ||||||| |||||||||| ||||||| |||||||| | || ||||||||
Sbjct: 264 ttctgctgctaggtggccaatggctatgattagcgactctgctccacttgaagaggagtt 205
Query: 1056 taagcagtgggttaagga-agtagagcgaagtggtgg 1091
| | |||||||||||| ||||||||||| ||||||
Sbjct: 204 ccaaccgtgggttaaggagagtagagcgaaatggtgg 168
Score = 63.9 bits (32), Expect = 3e-09
Identities = 84/100 (84%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 1154 ttgtttactcagcagctactgtgaag-cagatgttacaagagaaaaaatctgcctcatcg 1212
||||||||||||| |||||||||||| |||||||||| ||||||||| || |||| ||
Sbjct: 104 ttgtttactcagcggctactgtgaagccagatgttaccagagaaaaagtccccctcgtca 45
Query: 1213 agacggataaatgttgcagccgagaaggatcggttgaggt 1252
| | ||||||||||| || ||||||||| || ||||||
Sbjct: 44 cggcccataaatgttgctgctgagaaggataggctgaggt 5