Miyakogusa Predicted Gene
- Lj1g3v4528450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4528450.1 tr|G7KYF7|G7KYF7_MEDTR Pleiotropic drug
resistance protein OS=Medicago truncatula GN=MTR_7g098750
PE,85.61,0,P-loop containing nucleoside triphosphate hydrolases,NULL;
ATPases associated with a variety of cell,CUFF.32621.1
(3237 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS343429 similar to UniRef100_Q1M2R7 Cluster: PDR-like ... 1080 0.0
gnl|LJGI|DC594591 similar to UniRef100_Q1M2R7 Cluster: PDR-like ... 295 9e-79
gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromos... 163 9e-39
gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome... 129 1e-28
gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosom... 107 4e-22
gnl|LJGI|AV406931 similar to UniRef100_A7P7M5 Cluster: Chromosom... 100 1e-19
gnl|LJGI|BP055095 similar to UniRef100_A7PQG8 Cluster: Chromosom... 84 6e-15
gnl|LJGI|TC67731 70 9e-11
gnl|LJGI|DC597581 similar to UniRef100_Q5W274 Cluster: Pleiotrop... 60 9e-08
gnl|LJGI|DC593414 similar to UniRef100_A7P7M5 Cluster: Chromosom... 60 9e-08
gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable ... 56 1e-06
>gnl|LJGI|FS343429 similar to UniRef100_Q1M2R7 Cluster: PDR-like ABC-transporter; n=1;
Glycine max|Rep: PDR-like ABC-transporter - Glycine max
(Soybean), partial (17%)
Length = 742
Score = 1080 bits (545), Expect = 0.0
Identities = 692/741 (93%)
Strand = Plus / Plus
Query: 1 atggaaggtgggggtagtttcaggaatggcagttcatcaatttggaggaacagtgatgct 60
||||||||||||||||||||| || ||| | ||||||| ||||||||||||||||||||
Sbjct: 2 atggaaggtgggggtagtttcccgattggaaattcatcactttggaggaacagtgatgct 61
Query: 61 gatgagatcttctctaactccttccgccaagaggaagatgatgaagaagctctcaaatgg 120
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 62 gatgagatcttctctaactccttccaccaagaggaagatgatgaagaggctctcaaatgg 121
Query: 121 gcagcaattcagaaactccctacgtttgcgcgtctgaggaaaggcttgttgacttcacct 180
| || ||||||||||| ||||| ||| | ||| ||||||||| ||||||||||| |
Sbjct: 122 gatgccattcagaaactgcctacatttacacgtacgaggaaaggtttgttgacttcctcg 181
Query: 181 gaaggggaagccactgagatagagatcaagaaacttgggttgcaagaaaaaagagctttg 240
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 182 gaaggggaagccactgagatagatatcaagaaacttgggttgcaagaaagaagagctttg 241
Query: 241 cttgaaaggctggtgaagcttgctgaagaggacaatgagaggtttttgctcaagcttaga 300
|||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| |||
Sbjct: 242 cttgaaaggctggtgaggcttcctgaagaggacaatgagaggtttttgctgaagctcaga 301
Query: 301 cacaggcttgatagagttggaattgatcttcctactatagaagttcgatatgagcacttg 360
|| ||| ||||||||||||||||||| ||||| || ||||| ||||||| ||||||||||
Sbjct: 302 cataggattgatagagttggaattgaccttcccacaatagaggttcgatttgagcacttg 361
Query: 361 aacattgaagcagaagttcatgtaggaagtagaaatttgccaaccttctctaacttcatg 420
|||||||||||||||| || ||||||||||||||||||||| ||||| ||||||||| |
Sbjct: 362 aacattgaagcagaagctcgtgtaggaagtagaaatttgcccacctttactaacttcacg 421
Query: 421 gttaatatagtggagagcttgttgagctctcttcatgtacttccaagtaaaagacaacat 480
|| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 422 gtaaatatagtggagagcttgttgagctctcttcatgtacttccaagtagaagacaacat 481
Query: 481 attaatattctcaaggatgttagtggaataataaagccttccagaatgacattgcttttg 540
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 482 attaatattctcaaggatgttagtggaataataaagccttctagaatgacactgcttttg 541
Query: 541 ggccctccaagttctggaaaaactacactccttttggcattggctggaaaacttgatcca 600
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 542 ggccctccaagttcaggaaaaactacactcctgttggcattggctggaaaacttgatccg 601
Query: 601 aagttaaagttcactggaaaggtgacttacaatggtcatgggatgaatgagtttgtgccc 660
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 602 aagttaaagttcactggaaaggtgacttacaatggtcatgagatgaatgagtttgtaccc 661
Query: 661 caaagaactgctgcttatgttgatcaaaatgatcttcacatgggagaaatgactgtaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 caaagaactgctgcttatgttgatcaaaatgatcttcacatgggagaaatgactgtaaga 721
Query: 721 gaaaccttggccttctcagca 741
|||||||||||||||||||||
Sbjct: 722 gaaaccttggccttctcagca 742
>gnl|LJGI|DC594591 similar to UniRef100_Q1M2R7 Cluster: PDR-like ABC-transporter; n=1;
Glycine max|Rep: PDR-like ABC-transporter - Glycine max
(Soybean), partial (4%)
Length = 325
Score = 295 bits (149), Expect = 9e-79
Identities = 155/157 (98%)
Strand = Plus / Plus
Query: 769 gagttgttagcagaattatccagaagagagaaagagtcaaatatcaagcctgatccagat 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gagttgttagcagaattatccagaagagagaaagagtcaaatatcaagcctgatccagat 228
Query: 829 attgatgtctacatgaaggctgtagcaactgaaggccagaaggcaaatttgattacagat 888
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 229 attgatgtctacatgaaggctgtagcaactgaaggccacaaggcaaatttgattacagat 288
Query: 889 tatgtcctcagggttttgggacttgaggtctgtgctg 925
|||||||||| ||||||||||||||||||||||||||
Sbjct: 289 tatgtcctcacggttttgggacttgaggtctgtgctg 325
>gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (33%)
Length = 553
Score = 163 bits (82), Expect = 9e-39
Identities = 148/170 (87%)
Strand = Plus / Plus
Query: 3043 cttgtggcaaatccttctataatattcatggatgaaccaacttctgggcttgatgcaaga 3102
||||| || |||||||| || || |||||||||||||||||||| || || |||||||||
Sbjct: 276 cttgtcgcgaatccttcaatcattttcatggatgaaccaacttcaggcctcgatgcaaga 335
Query: 3103 gcagctgccattgtaatgagaacagttaggaacacagtggacactggaagaacagttgtc 3162
||||| |||||||| ||||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 336 gcagcagccattgttatgaggacagtgagaaacactgttgacactggaaggacagttgtc 395
Query: 3163 tgtacaatccaccaacctagcattgatatatttgaatcttttgatgagct 3212
|| ||||| ||||||||||| |||||||| |||||| | |||||||||||
Sbjct: 396 tgcacaattcaccaacctagtattgatatctttgaagcctttgatgagct 445
Score = 56.0 bits (28), Expect = 1e-06
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 2794 tttgcaaggatttctggatactgtgagcaaaatgatattcattc 2837
|||||||| ||||||||||||||||| |||| |||||| |||||
Sbjct: 27 tttgcaagaatttctggatactgtgaacaaactgatatccattc 70
>gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 715
Score = 129 bits (65), Expect = 1e-28
Identities = 98/109 (89%)
Strand = Plus / Plus
Query: 3118 atgagaacagttaggaacacagtggacactggaagaacagttgtctgtacaatccaccaa 3177
||||||||||| |||||||| |||||||| |||||||||||||| || || |||||||||
Sbjct: 5 atgagaacagtcaggaacactgtggacacaggaagaacagttgtatgcaccatccaccaa 64
Query: 3178 cctagcattgatatatttgaatcttttgatgagctttttctaatgaagc 3226
||||||||||| || |||||| ||||||||||||| || ||||||||||
Sbjct: 65 cctagcattgacatttttgaagcttttgatgagctattcctaatgaagc 113
>gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 461
Score = 107 bits (54), Expect = 4e-22
Identities = 123/146 (84%)
Strand = Plus / Plus
Query: 3067 ttcatggatgaaccaacttctgggcttgatgcaagagcagctgccattgtaatgagaaca 3126
|||||||||||||||||||| || || |||| |||||||| || ||||| ||||| |
Sbjct: 7 ttcatggatgaaccaacttcaggtctagatgttagagcagcagctattgttatgagggct 66
Query: 3127 gttaggaacacagtggacactggaagaacagttgtctgtacaatccaccaacctagcatt 3186
|| || ||||| ||||| ||||||||||||||||| || || || ||||| |||||||||
Sbjct: 67 gtcagaaacactgtggatactggaagaacagttgtttgcacgattcaccagcctagcatt 126
Query: 3187 gatatatttgaatcttttgatgagct 3212
||||| |||||| | |||||||||||
Sbjct: 127 gatatctttgaagcctttgatgagct 152
>gnl|LJGI|AV406931 similar to UniRef100_A7P7M5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 425
Score = 99.6 bits (50), Expect = 1e-19
Identities = 188/234 (80%)
Strand = Plus / Plus
Query: 1094 atgtccacattttcaaaggaactgcagtcatctcactcctccagccagcaccagagactt 1153
|||| |||||| |||| || ||||| || || ||||| |||||||||||||| |||||||
Sbjct: 15 atgttcacattctcaatggcactgctgttatatcactgctccagccagcacccgagactt 74
Query: 1154 acaacctctttgatgacattatcctactctctgacagtcacattgtgtaccaaggtcccc 1213
| |||| || ||||| || ||| || ||||||| | || |||||||||| |||||||
Sbjct: 75 atgaccttttcgatgatatcatcttaatctctgatggccaagttgtgtaccatggtcccc 134
Query: 1214 gcgaaaacgtgcttgaattttttgaatcaatgggttttcaatgtcctgagaggaaaggag 1273
||||| | || || || || || ||||| ||||| || ||||||||||||||||||| |
Sbjct: 135 gcgaatatgttctcgatttcttcgaatctatgggcttcaaatgtcctgagaggaaaggtg 194
Query: 1274 ttgcagactttttgcaagaagtgacatcaaggaaagatcaggagcagtactggg 1327
||| |||||| | || ||||| || |||| ||| ||||| || ||||||||||
Sbjct: 195 ctgctgactttcttcaggaagtaacttcaaagaaggatcaagaacagtactggg 248
>gnl|LJGI|BP055095 similar to UniRef100_A7PQG8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 538
Score = 83.8 bits (42), Expect = 6e-15
Identities = 147/182 (80%)
Strand = Plus / Plus
Query: 1135 cagccagcaccagagacttacaacctctttgatgacattatcctactctctgacagtcac 1194
||||||||||||||||| | | ||||| || ||||||||||| || || || ||||
Sbjct: 279 cagccagcaccagagacatttgaactcttcgacgacattatcctgctttcagaaggtcaa 338
Query: 1195 attgtgtaccaaggtccccgcgaaaacgtgcttgaattttttgaatcaatgggttttcaa 1254
||||| ||||||||||| || || |||||||| || |||||||| | |||||||| |
Sbjct: 339 attgtataccaaggtccacgagagaacgtgctagagttttttgagtacatgggtttcaag 398
Query: 1255 tgtcctgagaggaaaggagttgcagactttttgcaagaagtgacatcaaggaaagatcag 1314
|||||||| || ||||||| ||| |||||| | |||||||| ||||| | |||||| |||
Sbjct: 399 tgtcctgaaagaaaaggagctgctgactttctacaagaagtaacatccaagaaagaccag 458
Query: 1315 ga 1316
||
Sbjct: 459 ga 460
Score = 75.8 bits (38), Expect = 2e-12
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 955 ggtatctctggtggacaaaagaaacgcgttacaacaggggagatgctggttggaccagct 1014
||||||||||||||||| ||||| | || |||||||| ||||||||||| ||||| ||
Sbjct: 99 ggtatctctggtggacagaagaagagagtaacaacaggtgagatgctggtaggacctgca 158
Query: 1015 aaagctcttttcatggatgaaatatc 1040
|| || || |||||||||||||||||
Sbjct: 159 aaggcactcttcatggatgaaatatc 184
>gnl|LJGI|TC67731
Length = 865
Score = 69.9 bits (35), Expect = 9e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 atggaaggtgggggtagtttcaggaatggcagttc 35
|||||||||||||||||||||||||||||||||||
Sbjct: 300 atggaaggtgggggtagtttcaggaatggcagttc 334
>gnl|LJGI|DC597581 similar to UniRef100_Q5W274 Cluster: Pleiotropic drug resistance
protein 3; n=1; Nicotiana tabacum|Rep: Pleiotropic drug
resistance protein 3 - Nicotiana tabacum (Common
tobacco), partial (8%)
Length = 448
Score = 60.0 bits (30), Expect = 9e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 1015 aaagctcttttcatggatgaaatatctaccggtttggatagctcaacaac 1064
|||||||||||||||||||||||||| || || || |||||||| |||||
Sbjct: 9 aaagctcttttcatggatgaaatatcaactggcttagatagctccacaac 58
>gnl|LJGI|DC593414 similar to UniRef100_A7P7M5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 564
Score = 60.0 bits (30), Expect = 9e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 94 gaagatgatgaagaagctctcaaatgggcagcaattcagaaactccctac 143
|||||||||||||| ||||| |||||||| ||| || |||||||||||||
Sbjct: 412 gaagatgatgaagaggctctgaaatgggctgcacttgagaaactccctac 461
>gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable pleiotropic drug
resistance protein 3; n=1; Arabidopsis thaliana|Rep:
Probable pleiotropic drug resistance protein 3 -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 424
Score = 56.0 bits (28), Expect = 1e-06
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2710 atggatgttcttgctggtagaaaaactgggggctatattg 2749
||||||||||||||||| ||||||||||| || |||||||
Sbjct: 180 atggatgttcttgctggaagaaaaactggaggatatattg 141