Miyakogusa Predicted Gene
- Lj1g3v4528390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4528390.1 CUFF.32567.1
(1783 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58384 similar to UniRef100_Q7XJ98 Cluster: Xyloglucan... 519 e-146
gnl|LJGI|TC78568 similar to UniRef100_A7Q1K1 Cluster: Chromosome... 313 2e-84
gnl|LJGI|TC75223 weakly similar to UniRef100_Q7XJ98 Cluster: Xyl... 303 2e-81
gnl|LJGI|FS351098 weakly similar to UniRef100_A7NYY7 Cluster: Ch... 54 3e-06
gnl|LJGI|TC80868 weakly similar to UniRef100_Q7XJ98 Cluster: Xyl... 54 3e-06
>gnl|LJGI|TC58384 similar to UniRef100_Q7XJ98 Cluster: Xyloglucan
galactosyltransferase KATAMARI1; n=1; Arabidopsis
thaliana|Rep: Xyloglucan galactosyltransferase KATAMARI1
- Arabidopsis thaliana (Mouse-ear cress), partial (17%)
Length = 822
Score = 519 bits (262), Expect = e-146
Identities = 269/270 (99%), Gaps = 1/270 (0%)
Strand = Plus / Plus
Query: 288 cagaaagagcattgggtttcctgatttgaaggaagaacaagaatcccctgaggagaaaat 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cagaaagagcattgggtttcctgatttgaaggaagaacaagaatcccctgaggagaaaat 612
Query: 348 tttcccgtttacgagggcgttaagaactgctgaaaacaagagtgatccatgtggtgggag 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tttcccgtttacgagggcgttaagaactgctgaaaacaagagtgatccatgtggtgggag 672
Query: 408 gtatatttatgtacatgatcttccttccaggttcaatgaggacatgttgaaggaat-gca 466
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 673 gtatatttatgtacatgatcttccttccaggttcaatgaggacatgttgaaggaatggca 732
Query: 467 agagcttgagcaagtggaccaacatgtgcaagttcacaaccaatgctggtctcggtccac 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 agagcttgagcaagtggaccaacatgtgcaagttcacaaccaatgctggtctcggtccac 792
Query: 527 ctcttgagaatattgatggggttttctctg 556
||||||||||||||||||||||||||||||
Sbjct: 793 ctcttgagaatattgatggggttttctctg 822
Score = 299 bits (151), Expect = 3e-80
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 1 atgaggcggcgccctgtggcgggccttctccccgaccagatggagaaatcaacggccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atgaggcggcgccctgtggcgggccttctccccgaccagatggagaaatcaacggccaag 325
Query: 61 taccacaactcccgaatctgcttcctcgcttcactctccgctttcttctggttcttgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 taccacaactcccgaatctgcttcctcgcttcactctccgctttcttctggttcttgctc 385
Query: 121 ctctacttccacttcgtcgtcctcgccaccg 151
|||||||||||||||||||||||||||||||
Sbjct: 386 ctctacttccacttcgtcgtcctcgccaccg 416
>gnl|LJGI|TC78568 similar to UniRef100_A7Q1K1 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 490
Score = 313 bits (158), Expect = 2e-84
Identities = 161/162 (99%)
Strand = Plus / Plus
Query: 1622 gttggaaatatgaatttctggatgagggacagcgtgaggttggacctcatgaatgggacc 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttggaaatatgaatttctggatgagggacagcgtgaggttggacctcatgaatgggacc 60
Query: 1682 ctttcttctccaaaccgaaggatggcggtggggattccagtgattcctctgctgaagctg 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttcttctccaaaccgaaggatggcggtggggattccagtgattcctctgctgaagctg 120
Query: 1742 ccaaaaattcttggaagaatgagcaaagaagtcaacactgat 1783
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 ccaaaaattcttggaagaatgagcaaagaagtcaaccctgat 162
>gnl|LJGI|TC75223 weakly similar to UniRef100_Q7XJ98 Cluster: Xyloglucan
galactosyltransferase KATAMARI1; n=1; Arabidopsis
thaliana|Rep: Xyloglucan galactosyltransferase KATAMARI1
- Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 781
Score = 303 bits (153), Expect = 2e-81
Identities = 153/153 (100%)
Strand = Plus / Plus
Query: 288 cagaaagagcattgggtttcctgatttgaaggaagaacaagaatcccctgaggagaaaat 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cagaaagagcattgggtttcctgatttgaaggaagaacaagaatcccctgaggagaaaat 688
Query: 348 tttcccgtttacgagggcgttaagaactgctgaaaacaagagtgatccatgtggtgggag 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tttcccgtttacgagggcgttaagaactgctgaaaacaagagtgatccatgtggtgggag 748
Query: 408 gtatatttatgtacatgatcttccttccaggtt 440
|||||||||||||||||||||||||||||||||
Sbjct: 749 gtatatttatgtacatgatcttccttccaggtt 781
Score = 299 bits (151), Expect = 3e-80
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 1 atgaggcggcgccctgtggcgggccttctccccgaccagatggagaaatcaacggccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 atgaggcggcgccctgtggcgggccttctccccgaccagatggagaaatcaacggccaag 401
Query: 61 taccacaactcccgaatctgcttcctcgcttcactctccgctttcttctggttcttgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 taccacaactcccgaatctgcttcctcgcttcactctccgctttcttctggttcttgctc 461
Query: 121 ctctacttccacttcgtcgtcctcgccaccg 151
|||||||||||||||||||||||||||||||
Sbjct: 462 ctctacttccacttcgtcgtcctcgccaccg 492
>gnl|LJGI|FS351098 weakly similar to UniRef100_A7NYY7 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 660
Score = 54.0 bits (27), Expect = 3e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 1254 ttttgattccatgctggctggttgtatacctgttttcttccatccgggttcagcgtatac 1313
||||||||||||| ||||||||||| | |||||||| || ||||| ||| |||| ||| |
Sbjct: 558 ttttgattccatgttggctggttgtgttcctgttttttttcatcctggtacagcttattc 499
Query: 1314 aca 1316
|||
Sbjct: 498 aca 496
>gnl|LJGI|TC80868 weakly similar to UniRef100_Q7XJ98 Cluster: Xyloglucan
galactosyltransferase KATAMARI1; n=1; Arabidopsis
thaliana|Rep: Xyloglucan galactosyltransferase KATAMARI1
- Arabidopsis thaliana (Mouse-ear cress), partial (37%)
Length = 1565
Score = 54.0 bits (27), Expect = 3e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 793 gggagggaccattttcttgttgctgggaggattacttgggatttcaggagg 843
||||| || ||||| |||||| ||||||||||| |||||||||| ||||||
Sbjct: 616 gggagagatcatttccttgtttctgggaggatttcttgggatttgaggagg 666
Score = 54.0 bits (27), Expect = 3e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1254 ttttgattccatgctggctggttgtatacctgttttcttccatccgggttcagcgtatac 1313
||||||||||||| ||||||||||| | |||||||| || ||||| ||| |||| ||| |
Sbjct: 1074 ttttgattccatgttggctggttgtgttcctgttttttttcatcctggtacagcttattc 1133
Query: 1314 aca 1316
|||
Sbjct: 1134 aca 1136