Miyakogusa Predicted Gene
- Lj1g3v4528370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4528370.1 Non Chatacterized Hit- tr|I1N9V6|I1N9V6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,87.07,0,Leucine-rich repeats, typical (most populate,Leucine-rich
repeat, typical subtype; Serine/Threonine ,CUFF.32565.1
(2985 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP049306 weakly similar to UniRef100_A7Q1K6 Cluster: Ch... 620 e-176
gnl|LJGI|TC75278 similar to UniRef100_A7Q1K6 Cluster: Chromosome... 222 1e-56
gnl|LJGI|DC599998 weakly similar to UniRef100_A7Q1K6 Cluster: Ch... 145 2e-33
>gnl|LJGI|BP049306 weakly similar to UniRef100_A7Q1K6 Cluster: Chromosome chr7
scaffold_44, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_44, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 506
Score = 620 bits (313), Expect = e-176
Identities = 319/321 (99%)
Strand = Plus / Plus
Query: 1 atggagaagaacatgatgccaatgaaaacccattttttcatcttcttcttctgttacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 atggagaagaacatgatgccaatgaaaacccattttttcatcttcttcttctgttacatt 245
Query: 61 ggttgtttctcttacagttttgctgctgcaaatgatgaattatcagctttgctttcaata 120
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 246 ggttgtttctcttacagtttggctgctgcaaatgatgaattatcagcttggctttcaata 305
Query: 121 aaagcaggccttgttgatccattgaacacactgcaagattggaaattggtcgacaaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aaagcaggccttgttgatccattgaacacactgcaagattggaaattggtcgacaaagca 365
Query: 181 ctaggaaatgatgcagctcattgtaactggaatggagtcacatgcaactcagctggagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ctaggaaatgatgcagctcattgtaactggaatggagtcacatgcaactcagctggagca 425
Query: 241 gtagagaagcttgatctctcccacaagaatctaagcggcagagtatccgatgatttaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gtagagaagcttgatctctcccacaagaatctaagcggcagagtatccgatgatttaaca 485
Query: 301 agacttaaaagtcttacttct 321
|||||||||||||||||||||
Sbjct: 486 agacttaaaagtcttacttct 506
>gnl|LJGI|TC75278 similar to UniRef100_A7Q1K6 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 583
Score = 222 bits (112), Expect = 1e-56
Identities = 249/294 (84%), Gaps = 3/294 (1%)
Strand = Plus / Plus
Query: 2688 ggatgaaaagattgatgtttacagttatggagtagttttgttggagcttctcactggaaa 2747
|||||| |||||||| | || ||||||||||||||| |||||||||||||||| |||||
Sbjct: 1 ggatgagaagattgacatatatagttatggagtagttctgttggagcttctcacaggaaa 60
Query: 2748 acggcctttagatccggagtttggagagtctgtagacatagtagagtggattagaaggaa 2807
| |||||||||| ||||||| ||| ||| ||||||| || | ||||||||||| ||
Sbjct: 61 gcatcctttagatcaagagtttgtagaatctatagacattgttggatggattagaagcaa 120
Query: 2808 gattagacacaacaaatctctagaagaagcattagaccccagtgtaggaaacagcaacta 2867
||| | || ||||||||| ||| |||||||||||||||||||||||||| ||||
Sbjct: 121 gat---agactacaaatctccagagaaagcattagaccccagtgtaggaaactgcaagct 177
Query: 2868 tgttctagatgagatggttttagttctaagaatagcaattctctgcactgctaagttccc 2927
||||| ||| |||||| |||||||||| ||||||||| |||| ||||||||||| ||||
Sbjct: 178 tgttcaagaagagatgcttttagttcttagaatagcacttctttgcactgctaaactccc 237
Query: 2928 caaggacagaccaaccatgagggatgtcataatgatgcttgaagaggcaaagcc 2981
|||||||||||| ||||||||||||| ||||||||||| | ||||||||||||
Sbjct: 238 caaggacagaccctccatgagggatgttataatgatgctaggagaggcaaagcc 291
>gnl|LJGI|DC599998 weakly similar to UniRef100_A7Q1K6 Cluster: Chromosome chr7
scaffold_44, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_44, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 544
Score = 145 bits (73), Expect = 2e-33
Identities = 175/209 (83%)
Strand = Plus / Plus
Query: 223 tgcaactcagctggagcagtagagaagcttgatctctcccacaagaatctaagcggcaga 282
||||| ||||||||||| |||||||||||||||||||| |||| |||||| || || ||
Sbjct: 335 tgcaattcagctggagctgtagagaagcttgatctctctcacatgaatctgagtggaagc 394
Query: 283 gtatccgatgatttaacaagacttaaaagtcttacttctctcaacttgtgttgcaatgct 342
| ||| |||| || || ||||||||||| ||||||||||||||||| |||||||
Sbjct: 395 atctccaatgagatacaaaagcttaaaagtctcacttctctcaacttgtgctgcaatgga 454
Query: 343 ttctcatcaacattgccaaaatccatagccaatctcaccacactgaacagtcttgatgtg 402
|| ||| | ||| |||||||||||| |||||||||| ||||||| ||||||||||||
Sbjct: 455 tttgagtcatcgttgtcaaaatccatagtcaatctcacctcactgaagagtcttgatgtg 514
Query: 403 agccagaattccttcattggtgactttcc 431
|||||||||| ||||| |||||||||||
Sbjct: 515 agccagaatttcttcacaggtgactttcc 543