Miyakogusa Predicted Gene
- Lj1g3v4528360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4528360.1 CUFF.32564.1
(747 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67224 similar to UniRef100_Q8RW17 Cluster: Aux/IAA pr... 1043 0.0
gnl|LJGI|TC60778 similar to UniRef100_A7Q1K7 Cluster: Chromosome... 170 8e-42
gnl|LJGI|TC69855 similar to UniRef100_P32294 Cluster: Auxin-indu... 72 5e-12
gnl|LJGI|BW600269 similar to UniRef100_Q8RW17 Cluster: Aux/IAA p... 60 2e-08
gnl|LJGI|TC79115 similar to UniRef100_A7P779 Cluster: Chromosome... 56 3e-07
gnl|LJGI|TC77347 similar to UniRef100_O24543 Cluster: Auxin-indu... 56 3e-07
gnl|LJGI|TC70802 similar to UniRef100_A7PEL3 Cluster: Chromosome... 56 3e-07
gnl|LJGI|TC60581 similar to UniRef100_O24543 Cluster: Auxin-indu... 56 3e-07
gnl|LJGI|TC64632 homologue to UniRef100_O24542 Cluster: Auxin-in... 54 1e-06
gnl|LJGI|BW599222 52 5e-06
gnl|LJGI|TC65615 similar to UniRef100_A7P726 Cluster: Chromosome... 52 5e-06
>gnl|LJGI|TC67224 similar to UniRef100_Q8RW17 Cluster: Aux/IAA protein; n=1; Populus
tremula x Populus tremuloides|Rep: Aux/IAA protein -
Populus tremula x Populus tremuloides, partial (41%)
Length = 960
Score = 1043 bits (526), Expect = 0.0
Identities = 526/526 (100%)
Strand = Plus / Plus
Query: 1 atgcagggtagtgatgaaaacatggtcctttcctcagaggattcttcatccccagatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atgcagggtagtgatgaaaacatggtcctttcctcagaggattcttcatccccagatgag 278
Query: 61 actgagtgtcaccttcaattgggtctctccttgtccctctctccctatgccacttcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 actgagtgtcaccttcaattgggtctctccttgtccctctctccctatgccacttcttct 338
Query: 121 ttaagcagcagaagcaggactagttctcattctcattctgttctcaccaataacgctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttaagcagcagaagcaggactagttctcattctcattctgttctcaccaataacgctccc 398
Query: 181 accagtcaagtagttggatggccccctctcagagcatataggatgaacagctataatagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 accagtcaagtagttggatggccccctctcagagcatataggatgaacagctataatagc 458
Query: 241 catgcaaaatcccaagtcactgaagtattcaattctatggttgagaacagtaaggccaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 catgcaaaatcccaagtcactgaagtattcaattctatggttgagaacagtaaggccaat 518
Query: 301 attgctgtggtaaggaagagttctgacaatggcagtgttgataatagtatcattggcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 attgctgtggtaaggaagagttctgacaatggcagtgttgataatagtatcattggcaaa 578
Query: 361 gaaaacagaaaccccaggaccaggagttccctgtttgtgaaagtaaaaatggatggggta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gaaaacagaaaccccaggaccaggagttccctgtttgtgaaagtaaaaatggatggggta 638
Query: 421 ccaattggaaggaaggttgatttaagtgctcatagttcttatgaaaccttagctcaaagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ccaattggaaggaaggttgatttaagtgctcatagttcttatgaaaccttagctcaaagc 698
Query: 481 ttggaggatatgtttaatgaaccaaatacagttctcacttgcaaag 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ttggaggatatgtttaatgaaccaaatacagttctcacttgcaaag 744
Score = 157 bits (79), Expect = 1e-37
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 665 ggatgttcattagctctgttaggaggctaagaatcatggggacatctgaggctaatggac 724
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 744 ggatgttcattagctctgttaggaggctaagaatcatgaggacatctgaggctaatggac 803
Query: 725 ttgattggaagaacagaacagca 747
|||||||||||||||||||||||
Sbjct: 804 ttgattggaagaacagaacagca 826
>gnl|LJGI|TC60778 similar to UniRef100_A7Q1K7 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 1514
Score = 170 bits (86), Expect = 8e-42
Identities = 253/308 (82%), Gaps = 3/308 (0%)
Strand = Plus / Plus
Query: 420 accaattggaaggaaggttgatttaagtgctcatagttcttatgaaaccttagctcaaag 479
||||||||||||||| |||||||| || || |||||||| |||||||||||||| |||
Sbjct: 746 accaattggaaggaaagttgatttgagcgcccatagttcctatgaaaccttagcagaaac 805
Query: 480 cttggaggatatgtttaatgaaccaaatacagttctcacttgcaaagttggactaaatgg 539
||||| ||||||||||||||| ||| | || |||||||||||| | | |||||
Sbjct: 806 attggaagatatgtttaatgaatcaactgcatccatcacttgcaaaggttca---aatgg 862
Query: 540 agtgaatcatggtattatagctggagcagataggcactcaaaattgtttgatggatcttc 599
| ||| ||| ||||| ||||| ||| ||||| ||||| ||||| |||||||||||
Sbjct: 863 ggatgatcgtggcattatttttggaggagaaaggcattcaaagttgttggatggatcttc 922
Query: 600 caactttgtgcttacttatgaagacaaggaaggagactggatgcttgttggagatgttcc 659
||| |||||||| ||||||||||||||||||||||| |||||||| || || ||||||||
Sbjct: 923 caagtttgtgctcacttatgaagacaaggaaggagattggatgctggtcggggatgttcc 982
Query: 660 ttggtggatgttcattagctctgttaggaggctaagaatcatggggacatctgaggctaa 719
|||| ||||||||| | || || ||||| ||| | |||||| | ||||||||||||||
Sbjct: 983 ttgggggatgttcaccggttcagtgaggagactacggatcatgagaacatctgaggctaa 1042
Query: 720 tggacttg 727
||||||||
Sbjct: 1043 tggacttg 1050
Score = 60.0 bits (30), Expect = 2e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 13 gatgaaaacatggtcctttcctcagaggattcttcatccccagatgagactgag 66
||||| ||| ||| |||||| || |||||||||||||||||||||||| |||||
Sbjct: 288 gatgataacttggccctttcttctgaggattcttcatccccagatgagtctgag 341
>gnl|LJGI|TC69855 similar to UniRef100_P32294 Cluster: Auxin-induced protein 22B; n=1;
Vigna radiata var. radiata|Rep: Auxin-induced protein 22B
- Phaseolus aureus (Mung bean) (Vigna radiata), partial
(75%)
Length = 1944
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 612 tacttatgaagacaaggaaggagactggatgcttgttggagatgttcc 659
|||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 1326 tacttatgaagacaaggatggtgactggatgctagttggagatgttcc 1373
>gnl|LJGI|BW600269 similar to UniRef100_Q8RW17 Cluster: Aux/IAA protein; n=1; Populus
tremula x Populus tremuloides|Rep: Aux/IAA protein -
Populus tremula x Populus tremuloides, partial (9%)
Length = 262
Score = 60.0 bits (30), Expect = 2e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 13 gatgaaaacatggtcctttcctcagaggattcttcatccccagatgagactgag 66
||||| ||| ||| |||||| || |||||||||||||||||||||||| |||||
Sbjct: 72 gatgataacttggccctttcttctgaggattcttcatccccagatgagtctgag 125
>gnl|LJGI|TC79115 similar to UniRef100_A7P779 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 732
Score = 56.0 bits (28), Expect = 3e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 610 cttacttatgaagacaaggaaggagactggatgcttgttggagatgttccttggtggatg 669
||||| |||||||| || || ||||| ||||||||||| || |||||||||||| ||||
Sbjct: 186 cttacatatgaagataaagatggagattggatgcttgtcggggatgttccttgggagatg 245
Query: 670 ttca 673
||||
Sbjct: 246 ttca 249
>gnl|LJGI|TC77347 similar to UniRef100_O24543 Cluster: Auxin-induced protein 22E;
n=1; Vigna radiata var. radiata|Rep: Auxin-induced
protein 22E - Phaseolus aureus (Mung bean) (Vigna
radiata), partial (83%)
Length = 1083
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 612 tacttatgaagacaaggaaggagactggatgcttgttggagatgttcc 659
||||||||| |||||||| || || |||||||| ||||||||||||||
Sbjct: 694 tacttatgaggacaaggatggtgattggatgctggttggagatgttcc 741
>gnl|LJGI|TC70802 similar to UniRef100_A7PEL3 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1570
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 606 tgtgcttacttatgaagacaaggaaggagactggatgcttgttggagatgttccttggtg 665
|||||| || |||||||||||||| || || |||||||| ||||| |||||||| |||
Sbjct: 885 tgtgctaacctatgaagacaaggatggtgattggatgctagttggtgatgttccctggga 944
Query: 666 gatgttca 673
||||||||
Sbjct: 945 gatgttca 952
>gnl|LJGI|TC60581 similar to UniRef100_O24543 Cluster: Auxin-induced protein 22E;
n=1; Vigna radiata var. radiata|Rep: Auxin-induced
protein 22E - Phaseolus aureus (Mung bean) (Vigna
radiata), partial (83%)
Length = 1016
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 612 tacttatgaagacaaggaaggagactggatgcttgttggagatgttcc 659
||||||||| |||||||| || || |||||||| ||||||||||||||
Sbjct: 619 tacttatgaggacaaggatggtgattggatgctggttggagatgttcc 666
>gnl|LJGI|TC64632 homologue to UniRef100_O24542 Cluster: Auxin-induced protein 22D;
n=1; Vigna radiata var. radiata|Rep: Auxin-induced
protein 22D - Phaseolus aureus (Mung bean) (Vigna
radiata), partial (83%)
Length = 1009
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 613 acttatgaagacaaggaaggagactggatgcttgttggagatgttcc 659
||||||||||| || || || ||||||||||| ||||||||||||||
Sbjct: 566 acttatgaagataaagatggtgactggatgctggttggagatgttcc 612
>gnl|LJGI|BW599222
Length = 481
Score = 52.0 bits (26), Expect = 5e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 182 ccagtcaagtagttggatggccccctctcagagcatataggatgaacagctataatagcc 241
||||||||||| |||||||||| || || ||||| ||| |||||||||| ||||||||
Sbjct: 407 ccagtcaagtatttggatggcctccccttccagcatgtagaatgaacagctttaatagcc 466
Query: 242 atgcaaaatc 251
| || |||||
Sbjct: 467 aggccaaatc 476
>gnl|LJGI|TC65615 similar to UniRef100_A7P726 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 904
Score = 52.0 bits (26), Expect = 5e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 615 ttatgaagacaaggaaggagactggatgcttgttggagatgt 656
||||||||| || ||||||||| ||||||||||||| |||||
Sbjct: 400 ttatgaagataacgaaggagacaggatgcttgttggtgatgt 441