Miyakogusa Predicted Gene

Lj1g3v4516050.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4516050.1 Non Chatacterized Hit- tr|I1N633|I1N633_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,80,0.002,seg,NULL,BP061720.path1.1
         (159 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71764 similar to UniRef100_A7PMP4 Cluster: Chromosome...   315   4e-86
gnl|LJGI|BP061720 similar to UniRef100_A7PMP4 Cluster: Chromosom...   281   6e-76

>gnl|LJGI|TC71764 similar to UniRef100_A7PMP4 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=2; core
           eudicotyledons|Rep: Chromosome chr14 scaffold_21, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (11%)
          Length = 757

 Score =  315 bits (159), Expect = 4e-86
 Identities = 159/159 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggtatgtgcatttggcttcttattctatacaaggaagagggtatttccctttaggaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 atggtatgtgcatttggcttcttattctatacaaggaagagggtatttccctttaggaac 597

                                                                       
Query: 61  atgacctcagtcattgaactaggaactcacaatcacccacttccagtttcagccacagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atgacctcagtcattgaactaggaactcacaatcacccacttccagtttcagccacagcc 537

                                                  
Query: 121 atggattctagcacttctgctgctctttccatgctatag 159
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 536 atggattctagcacttctgctgctctttccatgctatag 498


>gnl|LJGI|BP061720 similar to UniRef100_A7PMP4 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=2; core
           eudicotyledons|Rep: Chromosome chr14 scaffold_21, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (5%)
          Length = 326

 Score =  281 bits (142), Expect = 6e-76
 Identities = 150/153 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtatgtgcatttggcttcttattctatacaaggaagagggtatttccctttaggaac 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31  atggtatgtgcattgggcttcttattctatacaaggaagagggtatttccctttaggaac 90

                                                                       
Query: 61  atgacctcagtcattgaactaggaactcacaatcacccacttccagtttcagccacagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 91  atgacctcagtcattgaactaggaactcacaatcacccacttccantttcagccacagcg 150

                                            
Query: 121 atggattctagcacttctgctgctctttccatg 153
           |||||||||||||||||||||||||||||||||
Sbjct: 151 atggattctagcacttctgctgctctttccatg 183