Miyakogusa Predicted Gene
- Lj1g3v4515870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4515870.1 Non Chatacterized Hit- tr|A5AGK9|A5AGK9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,33.21,5e-18,LRR_8,NULL; LRR_1,Leucine-rich repeat;
LRRNT_2,Leucine-rich repeat-containing N-terminal, type 2;
se,CUFF.32517.1
(2661 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593071 weakly similar to UniRef100_A7PH70 Cluster: Ch... 1043 0.0
gnl|LJGI|TC78364 similar to UniRef100_A7Q1M7 Cluster: Chromosome... 127 4e-28
>gnl|LJGI|DC593071 weakly similar to UniRef100_A7PH70 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 532
Score = 1043 bits (526), Expect = 0.0
Identities = 526/526 (100%)
Strand = Plus / Plus
Query: 1 atgaaaataacttctcagattgcaattttctctctagttttgggctgtatgcttgtagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 atgaaaataacttctcagattgcaattttctctctagttttgggctgtatgcttgtagct 66
Query: 61 atttcagctcagaaagaagcagaatctctgattacatggatgaacagtttgaactctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atttcagctcagaaagaagcagaatctctgattacatggatgaacagtttgaactctccc 126
Query: 121 ttaccttcttcatggaaacttgcaggcaacaacactagtccatgcaaatggacaagcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ttaccttcttcatggaaacttgcaggcaacaacactagtccatgcaaatggacaagcata 186
Query: 181 tcatgtgataaagcaggcactgttgttgagataaagcttccaaatgcaggccttgatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tcatgtgataaagcaggcactgttgttgagataaagcttccaaatgcaggccttgatgga 246
Query: 241 acactcaacaggtttgacttctctgcctttccaaatctcagtaatttcaatgtcagtatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 acactcaacaggtttgacttctctgcctttccaaatctcagtaatttcaatgtcagtatg 306
Query: 301 aataacctggttggagagataccaagtggaattggaaatgcaacaaagctgaaaacactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aataacctggttggagagataccaagtggaattggaaatgcaacaaagctgaaaacactt 366
Query: 361 gatttgggtagcaacaatttaaccaatccaatcccaccacaaataggaaaccttttagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gatttgggtagcaacaatttaaccaatccaatcccaccacaaataggaaaccttttagag 426
Query: 421 ctgcaagttcttatattttcaaacaattcactcttgaaacaaataccaagtcaacttagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctgcaagttcttatattttcaaacaattcactcttgaaacaaataccaagtcaacttagc 486
Query: 481 aatctgcagaacctttggcttcttgatttaggggcaaattatttgg 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aatctgcagaacctttggcttcttgatttaggggcaaattatttgg 532
>gnl|LJGI|TC78364 similar to UniRef100_A7Q1M7 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 395
Score = 127 bits (64), Expect = 4e-28
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 2598 gggacaggaggacagggaagtgtttacaaggcagtgcttcctacaggcgacatcttcgcg 2657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gggacaggaggacagggaagtgtttacaaggcagtgcttcctacaggcgacatcttcgcg 231
Query: 2658 gtga 2661
||||
Sbjct: 232 gtga 235