Miyakogusa Predicted Gene
- Lj1g3v4515780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4515780.1 Non Chatacterized Hit- tr|C6SZB1|C6SZB1_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,39.75,3e-17,RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20,NULL;
zf-HC5HC2H,NULL,gene.g36666.t1.1
(1221 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS329050 similar to UniRef100_Q3E7F4 Cluster: Uncharact... 700 0.0
gnl|LJGI|BP060014 weakly similar to UniRef100_A7Q1N8 Cluster: Ch... 666 0.0
>gnl|LJGI|FS329050 similar to UniRef100_Q3E7F4 Cluster: Uncharacterized protein
At1g04020.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At1g04020.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (8%)
Length = 738
Score = 700 bits (353), Expect = 0.0
Identities = 356/357 (99%)
Strand = Plus / Plus
Query: 169 gatgattctagggttttgcagcaatgccagacatttcgcgattcaagctatagtaatatt 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gatgattctagggttttgcagcaatgccagacatttcgcgattcaagctatagtaatatt 430
Query: 229 aagaaggctgataatttttcacaaagttcacccaattctaatgggtttggggttggtgag 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aagaaggctgataatttttcacaaagttcacccaattctaatgggtttggggttggtgag 490
Query: 289 aatcgcaaatctatgattacaatgcatgttaaaccagaggagcttgagatgtctagtggg 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aatcgcaaatctatgattacaatgcatgttaaaccagaggagcttgagatgtctagtggg 550
Query: 349 ggaagagctggctttcgtaatgatgtaaagccttatccaatgcaacgctcccgggttgaa 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggaagagctggctttcgtaatgatgtaaagccttatccaatgcaacgctcccgggttgaa 610
Query: 409 attggggactatgtggaaatggatgtgaatcaagtgacacaagctgcagtctacagccct 468
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 attggggaccatgtggaaatggatgtgaatcaagtgacacaagctgcagtctacagccct 670
Query: 469 ccattttgtgataccaaaggttcggataatgactgcagcgaactagacagtgatcat 525
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ccattttgtgataccaaaggttcggataatgactgcagcgaactagacagtgatcat 727
Score = 198 bits (100), Expect = 6e-50
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 atggaagattctggaaaaccgaacaacaagagcaaactcatgaatccatggatgctccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 atggaagattctggaaaaccgaacaacaagagcaaactcatgaatccatggatgctccac 112
Query: 61 ttccagaaactcgctctcgaactcaaatgccctctctgtt 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ttccagaaactcgctctcgaactcaaatgccctctctgtt 152
Score = 145 bits (73), Expect = 7e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 99 ttcctgcttggttgatagctccctttctggctctgaatgtgctgtttgcaaaactaagta 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttcctgcttggttgatagctccctttctggctctgaatgtgctgtttgcaaaactaagta 264
Query: 159 tgctcaaacagat 171
|||||||||||||
Sbjct: 265 tgctcaaacagat 277
>gnl|LJGI|BP060014 weakly similar to UniRef100_A7Q1N8 Cluster: Chromosome chr7
scaffold_44, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_44, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 366
Score = 666 bits (336), Expect = 0.0
Identities = 350/352 (99%), Gaps = 2/352 (0%)
Strand = Plus / Plus
Query: 769 ttgaatccaagtacaagtatctgttcgttttgccaatcctccgaaacttcagaggctact 828
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 17 ttgaatccaagtacaagtatctgttcgttt-gccaatcctccgaaacttcagaggctac- 74
Query: 829 ggacccatgcttcattatgcaaatggaaagtcagttataggagatgctgcaatgcaaccg 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 ggacccatgcttcattatgcaaatggaaagtcagttataggagatgctgcaatgcaaccg 134
Query: 889 aatgtcatacacgtgcatagatgctgtgttgactgggcaccacaagtgtattttgttgat 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 aatgtcatacacgtgcatagatgctgtgttgactgggcaccacaagtgtattttgttgat 194
Query: 949 gaaacttgtaagaacttgaaggcagaagtggcaaggggagcaaagctgaaatgcagcaca 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gaaacttgtaagaacttgaaggcagaagtggcaaggggagcaaagctgaaatgcagcaca 254
Query: 1009 tgtggtctaaaaggagctgctcttggctgctatgtcaaatcatgtaaaagaacttatcat 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgtggtctaaaaggagctgctcttggctgctatgtcaaatcatgtaaaagaacttatcat 314
Query: 1069 gttccttgtgcaatggatgtttcaacttgccgctgggatcaagagaagtatc 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gttccttgtgcaatggatgtttcaacttgccgctgggatcaagagaagtatc 366