Miyakogusa Predicted Gene
- Lj1g3v4515690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4515690.1 Non Chatacterized Hit- tr|I1JP58|I1JP58_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.31,0,no
description,Tetratricopeptide-like helical; TPR,Tetratricopeptide
repeat; TPR_REGION,Tetratricope,CUFF.32508.1
(2190 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81130 weakly similar to UniRef100_A7NXF5 Cluster: Chr... 745 0.0
gnl|LJGI|TC71474 weakly similar to UniRef100_A7NXF5 Cluster: Chr... 147 3e-34
gnl|LJGI|BW595163 weakly similar to UniRef100_A7Q1P5 Cluster: Ch... 131 2e-29
gnl|LJGI|TC70683 similar to UniRef100_A7NXF5 Cluster: Chromosome... 115 1e-24
>gnl|LJGI|TC81130 weakly similar to UniRef100_A7NXF5 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 784
Score = 745 bits (376), Expect = 0.0
Identities = 376/376 (100%)
Strand = Plus / Plus
Query: 1815 ggtgtgtctttcaaaatctaaggccttcagacaatacaccgcttctagatgtcatgtaat 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgtgtctttcaaaatctaaggccttcagacaatacaccgcttctagatgtcatgtaat 60
Query: 1875 aggtacaatgcacgaagcaaagggcctatacaaagaggctgtaaaagcttttcgcgatgc 1934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtacaatgcacgaagcaaagggcctatacaaagaggctgtaaaagcttttcgcgatgc 120
Query: 1935 tttgaacattgatcccagacatgtacccagcttgatatccactgctgtggctcttagacg 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttgaacattgatcccagacatgtacccagcttgatatccactgctgtggctcttagacg 180
Query: 1995 gtggagtaatcaatcagatcctgttgtcagaagctttctgatggatgcactacgttatga 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggagtaatcaatcagatcctgttgtcagaagctttctgatggatgcactacgttatga 240
Query: 2055 cagattgaatgcttctgcttggtataatctcggcattcttcacaaggctgaaggtagagt 2114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagattgaatgcttctgcttggtataatctcggcattcttcacaaggctgaaggtagagt 300
Query: 2115 gctagaagctgtagaatgttttcaggcagcaaattctcttgaagaaacagcaccaattga 2174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctagaagctgtagaatgttttcaggcagcaaattctcttgaagaaacagcaccaattga 360
Query: 2175 acctttcagatgactg 2190
||||||||||||||||
Sbjct: 361 acctttcagatgactg 376
>gnl|LJGI|TC71474 weakly similar to UniRef100_A7NXF5 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 609
Score = 147 bits (74), Expect = 3e-34
Identities = 274/342 (80%), Gaps = 9/342 (2%)
Strand = Plus / Plus
Query: 1855 gcttctagatgtcatgtaataggtacaatgcacgaagcaaagggcctatacaaagaggct 1914
|||||| ||||||||| | ||||| ||| | ||||||||||| || ||||| || |||
Sbjct: 11 gcttctcgatgtcatgcatcaggtatgatgtatgaagcaaagggtctttacaaggaagct 70
Query: 1915 gtaaaagcttttcgcgatgctttgaacattgatcccagacatgtacccagcttgatatcc 1974
| | |||||||||||| |||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 71 ctgacagcttttcgcgaagctttggacattgatcccgatcatgtccccagcttaatctcc 130
Query: 1975 actgctgtggctcttagacggtggagtaatcaatcagatcctgttgtcagaagctttctg 2034
|||||| | | ||| | ||| || | ||||| |||| |||| | ||||| |||||||||
Sbjct: 131 actgctctagttctcaaacgatgcactaatccatcaaatccagcggtcaggagctttctg 190
Query: 2035 atggatgcactacgttatgacagattgaatgcttctgcttggtataatctcggcattctt 2094
||||| || ||||| | ||||| |||||||||||||||||||||||||| ||| |||||
Sbjct: 191 atggacgcgctacggcacgacaggttgaatgcttctgcttggtataatcttggccttctt 250
Query: 2095 cacaaggctgaaggta---------gagtgctagaagctgtagaatgttttcaggcagca 2145
||||||||||| || | |||| | ||||||| ||| |||||||||||||||
Sbjct: 251 cacaaggctgagggaacagcatcatcagtggttgaagctgcagagtgttttcaggcagca 310
Query: 2146 aattctcttgaagaaacagcaccaattgaacctttcagatga 2187
| ||||| |||||| | ||||| |||||||||||||||||
Sbjct: 311 tactctctcgaagaatcggcaccggttgaacctttcagatga 352
>gnl|LJGI|BW595163 weakly similar to UniRef100_A7Q1P5 Cluster: Chromosome chr7
scaffold_44, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_44, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 485
Score = 131 bits (66), Expect = 2e-29
Identities = 120/138 (86%)
Strand = Plus / Plus
Query: 1005 aagagaaaggtaccatgcccttgctctttgttattatggagcaggtaaggacatggtagc 1064
|||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||
Sbjct: 57 aagagaaaggtaccatgctcttgctctctgttattatggagcaggtaaggacttggtagc 116
Query: 1065 actgaatcttctgagaagattattgaatagcagagagaatccaagtcatgttcctgcttt 1124
|||| ||||||| |||| ||||| || || ||| || | |||| |||||||| | |||
Sbjct: 117 actggatcttctcagaaaattatcgagtaatagaaaggaaccaaaacatgttccaggttt 176
Query: 1125 gttaatggcttctaagat 1142
|||| |||||||||||||
Sbjct: 177 gttattggcttctaagat 194
>gnl|LJGI|TC70683 similar to UniRef100_A7NXF5 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 589
Score = 115 bits (58), Expect = 1e-24
Identities = 124/146 (84%)
Strand = Plus / Plus
Query: 168 gccggattccggtaatatagaagaagccgaatcctcgttacgcgagagcggcaacttgaa 227
||||||| | || |||||||||||||| ||||| || ||||| ||||| ||| ||||||
Sbjct: 408 gccggatacggggaatatagaagaagctgaatcatctttacgtgagagtggcgtcttgaa 467
Query: 228 ctatgaggaagctagagctttattaggaagatatgaatttcaggaaggaaatatagaagc 287
||||||||||||||||||| | | ||||||||||||| |||| |||||||| ||| |||
Sbjct: 468 ctatgaggaagctagagctctgctgggaagatatgaatatcagaaaggaaatttagtagc 527
Query: 288 cgctttacatgtttttgaaggaatag 313
||| || ||||| ||||| |||||||
Sbjct: 528 cgccttgcatgtctttgagggaatag 553