Miyakogusa Predicted Gene
- Lj1g3v4515520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4515520.1 NODE_49934_length_1584_cov_8.070076.path1.1
(1023 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61010 UniRef100_Q53VE2 Cluster: Ser/Thr protein kinas... 242 4e-63
gnl|LJGI|CB829620 homologue to UniRef100_Q53VE2 Cluster: Ser/Thr... 167 2e-40
gnl|LJGI|FS350851 similar to UniRef100_A7NXD3 Cluster: Chromosom... 163 3e-39
gnl|LJGI|TC73759 similar to UniRef100_A7P4N8 Cluster: Chromosome... 141 1e-32
gnl|LJGI|TC63376 similar to UniRef100_A7NTW4 Cluster: Chromosome... 60 3e-08
gnl|LJGI|BW612048 similar to UniRef100_A7NXD3 Cluster: Chromosom... 54 2e-06
>gnl|LJGI|TC61010 UniRef100_Q53VE2 Cluster: Ser/Thr protein kinase; n=1; Lotus
japonicus|Rep: Ser/Thr protein kinase - Lotus japonicus,
complete
Length = 2146
Score = 242 bits (122), Expect = 4e-63
Identities = 341/414 (82%)
Strand = Plus / Plus
Query: 346 cttgcttattctactgttggtacaccagattatattgctccagaagttctattgaagaaa 405
|||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 1074 cttgcttattctacggttggaacaccagattatattgctccagaagttctgctgaagaaa 1133
Query: 406 ggttatgggatggaatgtgattggtggtcacttggagctatcatgtatgaaatgctggtg 465
|| ||||| |||||||||| |||||||| || |||||||| |||||||||||||| ||
Sbjct: 1134 ggatatggcgtggaatgtgactggtggtctctaggagctataatgtatgaaatgcttgtc 1193
Query: 466 ggatatccgcctttttattctgatgatccaatgtcaacatgtaggaagatagtaaattgg 525
|| |||||||| |||||||| ||||| |||||| ||| ||||| ||||| || ||||||
Sbjct: 1194 gggtatccgcccttttattcagatgaaccaatgcaaacttgtagaaagattgtgaattgg 1253
Query: 526 aaatcacacttaaagtttcctgaagaagtaaagttatctccggaggccaaagatcttata 585
| | | || ||||| ||||| ||||||| || | || || ||||| || || |||||
Sbjct: 1254 agaactcatttaaaatttccagaagaagctaaactgtcaccagaggctaaggaccttatt 1313
Query: 586 gttaagcttttgtgtaatgtcaaccagaggttggggtcaaatggtgcatatgaaataaag 645
|| || |||||||||| | |||||| |||| | || || || |||||||||||
Sbjct: 1314 tgtagactcctgtgtaatgtggagcagaggctgggaactaaaggagctgatgaaataaag 1373
Query: 646 gctcatccattctttgaaggtgttgaatgggataaattgtatcacatggatgctgcattt 705
||||| |||| || || ||| |||||||||| |||||||| || ||| | ||||| |||
Sbjct: 1374 gctcacccatggttcgatggtattgaatgggacaaattgtaccaaatgaaagctgctttt 1433
Query: 706 attcctgaggtcaatgatgatttagatactcaaaactttgaaaagtttgaagag 759
|| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 1434 atacctgaggtcaatgatgaattagatactcaaaattttgagaagtttgaagag 1487
>gnl|LJGI|CB829620 homologue to UniRef100_Q53VE2 Cluster: Ser/Thr protein kinase; n=1;
Lotus japonicus|Rep: Ser/Thr protein kinase - Lotus
japonicus, partial (33%)
Length = 548
Score = 167 bits (84), Expect = 2e-40
Identities = 217/260 (83%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 325 tggcagaagaacaggaggacacttgcttattctactgttggtacaccagattatattgct 384
|||||||| || ||| | |||||||| |||||||| ||||| ||||| || ||||||||
Sbjct: 190 tggcagaaaaataggcgaacacttgcctattctacggttggaacacctgactatattgcc 249
Query: 385 ccagaagttctattgaagaaaggttatgggatggaatgtgattggtggtcacttggagct 444
|| |||||||| |||||||||| ||||| |||||||||||||||||||| | |||| |
Sbjct: 250 cctgaagttctgctgaagaaaggatatggcatggaatgtgattggtggtctttgggaggt 309
Query: 445 atcatgtatgaaatgctggtgggatatccgcctttttattctgatgatccaatgtcaaca 504
|| |||||||||||||| || |||||||| || |||||||| ||||| ||||||| ||
Sbjct: 310 ataatgtatgaaatgctagtaggatatcc-cccttttattcagatgaaccaatgttgact 368
Query: 505 tgtaggaagatagtaaattggaaatcacacttaaagtttcctgaagaagtaaagttatct 564
||||| |||||||||||||||| | | || ||||| ||||| ||||||| || |||||
Sbjct: 369 tgtagaaagatagtaaattggagaactcatttaaaatttccagaagaagctaaactatct 428
Query: 565 ccggaggccaaagatcttat 584
|| ||||| || ||||||||
Sbjct: 429 ccagaggcaaaggatcttat 448
Score = 52.0 bits (26), Expect = 7e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 145 aagcctgataacttactacttgatagatatggacacttgagactgtcagattttggacta 204
|||||||| ||||| || || |||||| |||| ||| ||| | | ||||| |||||| ||
Sbjct: 1 aagcctgacaacttgctgctagatagaaatggtcacatgaaattatcagactttggatta 60
Query: 205 tgtaaaccattagactgtagta 226
||||||||| ||||||| ||||
Sbjct: 61 tgtaaaccactagactgcagta 82
>gnl|LJGI|FS350851 similar to UniRef100_A7NXD3 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 794
Score = 163 bits (82), Expect = 3e-39
Identities = 169/195 (86%), Gaps = 6/195 (3%)
Strand = Plus / Minus
Query: 774 tcaatcatcatcaagagctggtccatggagaaagatgctttcatctaaggacttgaactt 833
|||||||||| |||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 782 tcaatcatcaagaagagctggtccatggaggaagatgctttcgtccaaggacttgaattt 723
Query: 834 tgtgggatacacatacaagaactttgaaattgttaacgactaccaagttcctggaatggc 893
||| |||||||| ||||||||||| |||||||| || || |||||||||||||| |||||
Sbjct: 722 tgttggatacacgtacaagaacttcgaaattgtcaatgattaccaagttcctgggatggc 663
Query: 894 tgaatt---gaagaaagcctccaaatctaagaagaagccatccatcaagtcactgtttga 950
|||| | ||||||| | |||||||| ||| ||| ||||||||||||||||| |||||
Sbjct: 662 tgaactgaagaagaaaccgtccaaatcaaag-aga--ccatccatcaagtcactttttga 606
Query: 951 ttgtgagtcagagat 965
|| |||||| |||||
Sbjct: 605 ttctgagtcggagat 591
>gnl|LJGI|TC73759 similar to UniRef100_A7P4N8 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (89%)
Length = 1476
Score = 141 bits (71), Expect = 1e-32
Identities = 116/131 (88%)
Strand = Plus / Plus
Query: 367 acaccagattatattgctccagaagttctattgaagaaaggttatgggatggaatgtgat 426
|||||||| || |||||||| ||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1057 acaccagactacattgctcctgaagtacttttgaagaaaggatatgggatggaatgtgat 1116
Query: 427 tggtggtcacttggagctatcatgtatgaaatgctggtgggatatccgcctttttattct 486
|||||||||||||||||||| ||||||||||||||||| || || || || ||||| ||
Sbjct: 1117 tggtggtcacttggagctattatgtatgaaatgctggttggttaccctccattttactcc 1176
Query: 487 gatgatccaat 497
||||| |||||
Sbjct: 1177 gatgacccaat 1187
>gnl|LJGI|TC63376 similar to UniRef100_A7NTW4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 1060
Score = 60.0 bits (30), Expect = 3e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 400 aagaaaggttatgggatggaatgtgattggtggtcacttggagctatcatgtatgaaatg 459
||||| || ||||| || ||||||||||||||||| ||||| || ||||||||||| |||
Sbjct: 126 aagaagggatatggaatagaatgtgattggtggtctcttggggcaatcatgtatgagatg 185
Query: 460 ct 461
||
Sbjct: 186 ct 187
>gnl|LJGI|BW612048 similar to UniRef100_A7NXD3 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 479
Score = 54.0 bits (27), Expect = 2e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 592 cttttgtgtaatgtcaaccagaggttggggt 622
|||||||||||||||||||||||| ||||||
Sbjct: 449 cttttgtgtaatgtcaaccagaggctggggt 479