Miyakogusa Predicted Gene
- Lj1g3v4515490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4515490.1 NODE_30971_length_2312_cov_57.661766.path1.1
(1824 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC595599 similar to UniRef100_A7Q1R5 Cluster: Chromosom... 674 0.0
gnl|LJGI|TC81839 similar to UniRef100_A7Q1R5 Cluster: Chromosome... 583 e-165
gnl|LJGI|BW594353 similar to UniRef100_A7Q1R5 Cluster: Chromosom... 448 e-125
gnl|LJGI|TC79857 274 2e-72
gnl|LJGI|DC597677 homologue to UniRef100_A7Q1R5 Cluster: Chromos... 238 1e-61
gnl|LJGI|TC74821 weakly similar to UniRef100_A7Q1R5 Cluster: Chr... 96 9e-19
gnl|LJGI|TC73352 74 3e-12
gnl|LJGI|TC76078 similar to UniRef100_A7NXD1 Cluster: Chromosome... 62 1e-08
gnl|LJGI|BP055480 56 8e-07
gnl|LJGI|BP062727 similar to UniRef100_A7QT88 Cluster: Chromosom... 54 3e-06
>gnl|LJGI|DC595599 similar to UniRef100_A7Q1R5 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 378
Score = 674 bits (340), Expect = 0.0
Identities = 370/379 (97%), Gaps = 1/379 (0%)
Strand = Plus / Plus
Query: 572 caattgctaatatgctcaattttccaaacaatataaacaacggaggaagactccggtctg 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caattgctaatatgctcaattttccaaacaatataaacaacggaggaagactccggtctg 60
Query: 632 ttcttgatgttggatgtggagttgcaagctttggaggatatcttcttgcttctgatgtga 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcttgatgttggatgtggagttgcaagctttggaggatatcttcttgcttctgatgtga 120
Query: 692 tagcaatgtcattagcaccaaatgatgttcatcaaaaccaaatccagtttgctttagaga 751
|| ||||| | | | | ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 tancaatggcgtga-cggcaaatgatgttcatcaaaacccaatccagtttgctttagaga 179
Query: 752 gagggataccggcatatcttggtgtgttaggtaccctgagactcccttaccccagtagat 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gagggataccggcatatcttggtgtgttaggtaccctgagactcccttaccccagtagat 239
Query: 812 cttttgaacttgctcattgttctcgctgtcgaattgattggcttcagagagatggcatgc 871
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 240 cttttgaacttgctcattgttctcgctgtccaattgattggcttcagagagatggcatgc 299
Query: 872 tactccttgagttggataggctactcaggccaggaggttactttgtatactcatctcctg 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tactccttgagttggataggctactcaggccaggaggttactttgtatactcatctcctg 359
Query: 932 aagcatatgaaacggatga 950
|||||||||||||||||||
Sbjct: 360 aagcatatgaaacggatga 378
>gnl|LJGI|TC81839 similar to UniRef100_A7Q1R5 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 1106
Score = 583 bits (294), Expect = e-165
Identities = 458/512 (89%), Gaps = 3/512 (0%)
Strand = Plus / Plus
Query: 230 ttccagtatgtgatgatagtttatctgagctgattccgtgcttggatagaaacctcatat 289
||||||||||||||||| || | |||||||| ||||| || | |||||||| |||||||
Sbjct: 595 ttccagtatgtgatgatcgtctctctgagctaattccctgtctagatagaaatctcatat 654
Query: 290 accaaacaagattgaagcttgatttgtctttgatggagcactatgagagacactgcccaa 349
| |||||||||| |||||||||| || | ||||||||||| |||||| |||| |||||||
Sbjct: 655 atcaaacaagatcgaagcttgatatgacattgatggagcattatgagcgacattgcccaa 714
Query: 350 ttcctgagaggcgttttaattgtttagttcctccccctccagggtacaagactccaatca 409
| ||||| ||||||| ||||||||| |||| || |||||||||||||||| ||||||||
Sbjct: 715 tgcctgacaggcgttataattgtttgattccgcctcctccagggtacaagattccaatca 774
Query: 410 agtggcccaaaagcagagaccaggtatggaaggaaaatatacctcacacccatcttgcaa 469
||||||||||||||||||| ||||| ||||||| |||||||||||| || ||||||||||
Sbjct: 775 agtggcccaaaagcagagatcaggtgtggaaggcaaatatacctcatactcatcttgcaa 834
Query: 470 ctgagaaatcagaccagaactggatggttgtaaaaggtgaaagaattctttttcctggtg 529
|||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 835 ctgagaaatctgaccagaactggatggttgtaaaaggtgaaaagatagtttttcctggtg 894
Query: 530 gaggaacccacttccattatggtgctgataagtatattgcatcaattgctaatatgctca 589
||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 895 gaggaacccacttccattacggtgctgataaatatattgcatcaattgccaatatgctca 954
Query: 590 attttccaaacaa---tataaacaacggaggaagactccggtctgttcttgatgttggat 646
||||||| ||||| |||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 955 attttccgaacaatgttataaacaacggaggaagactccgtagtgttcttgatgttggct 1014
Query: 647 gtggagttgcaagctttggaggatatcttcttgcttctgatgtgatagcaatgtcattag 706
|||| |||||||||||||||||||| |||||| |||||||||| | |||||||||||||
Sbjct: 1015 gtggtgttgcaagctttggaggataccttctttcttctgatgtagttgcaatgtcattag 1074
Query: 707 caccaaatgatgttcatcaaaaccaaatccag 738
| ||||||||||||||| ||||||||||||||
Sbjct: 1075 cgccaaatgatgttcatgaaaaccaaatccag 1106
>gnl|LJGI|BW594353 similar to UniRef100_A7Q1R5 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 488
Score = 448 bits (226), Expect = e-125
Identities = 409/470 (87%)
Strand = Plus / Plus
Query: 1091 agcctccactctgcagttctgatgatgatcctgatgcagtttggggagttaaaatggaag 1150
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 10 agcctccactctgcagttctgatgatgatcctgatgctgtttggggagttaaaatgaaag 69
Query: 1151 cttgcatttcacgctattcttctcaaatgcacaaagcaaaaggaagtggcttggctcctt 1210
||||||| || || || ||| ||| ||||||| ||||||||||| ||| ||| ||||||
Sbjct: 70 cttgcatctcgcgttactctaatcagatgcacagagcaaaaggaactggtttgtctcctt 129
Query: 1211 ggccagctcgattaactactccacctcctcgtcttgcagaaattgactattctactgaaa 1270
||||||||||||| ||||||||||||||||||||||| || || ||||||| | |||||
Sbjct: 130 ggccagctcgattgactactccacctcctcgtcttgccgactttaactattcgagtgaaa 189
Query: 1271 tgtttcagaaggacatggaactttggcaacaacaagttcataattactggagcaagctag 1330
||||||| ||||||||||| ||||||||||| ||| |||| || |||| | |||||
Sbjct: 190 tgtttcaaaaggacatggatgcttggcaacaacgggttgataactattggaaaatgctag 249
Query: 1331 gcagtaagattaagccagacacaattcggaatgtgatggatatgaaggcaaatttgggtt 1390
||| ||| |||||||| |||||| || | ||||||||||| ||||| |||||||||||||
Sbjct: 250 gcaataaaattaagcctgacacagttagaaatgtgatggacatgaacgcaaatttgggtt 309
Query: 1391 catttgcttctgctttgaaggacaaagatgtttgggttatgaatgtggttccagaagatg 1450
||||||| ||||||||||||| |||||||||||||| |||||||| || |||||| |||
Sbjct: 310 catttgcagctgctttgaaggataaagatgtttgggtgatgaatgttgtgccagaaaatg 369
Query: 1451 ggcaaaacacactcaagataatatatgacagaggattgattggaacagttcacagctggt 1510
||| ||||||||||||||| || ||||| |||||| | | ||||||||||||| |||||
Sbjct: 370 ggccaaacacactcaagatcatttatgatagaggactattaggaacagttcacaactggt 429
Query: 1511 gtgaagctttctcaacctaccctagaacttatgatctgctccatgcatgg 1560
||||||| || |||||||||||| | ||||||||||| ||||||||||||
Sbjct: 430 gtgaagcattttcaacctaccctcgcacttatgatcttctccatgcatgg 479
>gnl|LJGI|TC79857
Length = 414
Score = 274 bits (138), Expect = 2e-72
Identities = 198/215 (92%), Gaps = 4/215 (1%)
Strand = Plus / Plus
Query: 1614 tgagatggatagaattctgaggccaaaaggtttcatcattgtccatgataagaagtcagt 1673
||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||
Sbjct: 1 tgagatggatagaattctgaggccaaacgctttcatccttgtccatgataagaagtcagt 60
Query: 1674 ggtggagcttataaagaagtatttgccagcatta-cactgggaggcagtga-caatatat 1731
|||||||||||||||||||||||||||||| ||| | |||||||||||||| | ||||||
Sbjct: 61 ggtggagcttataaagaagtatttgccagccttacccctgggaggcagtgacccatatat 120
Query: 1732 g-atgtagatcaaggtgaggagggaaata-cggtgttaataattcnnnnnnngatgtggc 1789
| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 121 gaatgtagatcaaggtgaggagggaaatagcggtgttaataattcaaacaaagatgtggc 180
Query: 1790 tcataagtgatagcatccaggtttcagaatgatgc 1824
|||||||||||||||||||||||||||||||||||
Sbjct: 181 tcataagtgatagcatccaggtttcagaatgatgc 215
>gnl|LJGI|DC597677 homologue to UniRef100_A7Q1R5 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 591
Score = 238 bits (120), Expect = 1e-61
Identities = 406/499 (81%), Gaps = 3/499 (0%)
Strand = Plus / Plus
Query: 445 aatatacctcacacccatcttgcaactgagaaatcagaccagaactggatggttgtaaaa 504
|||||||| || || || |||||||||||||| || ||||||||||||||| ||||||||
Sbjct: 64 aatataccacatactcaccttgcaactgagaagtctgaccagaactggatgattgtaaaa 123
Query: 505 ggtgaaagaattctttttcctggtggaggaacccacttccattatggtgctgataagtat 564
||||||| || | || ||||| || || || || ||||| ||||| |||||||||||
Sbjct: 124 ggtgaaaagatattcttccctggagggggtactcatttccactatggagctgataagtac 183
Query: 565 attgcatcaattgctaatatgctcaattt-tccaaaca--atataaacaacggaggaaga 621
|||||||||||||| || |||||||| || |||||| | || | ||||| | |||||||
Sbjct: 184 attgcatcaattgcaaagatgctcaacttctccaaaaataatcttaacaatgaaggaaga 243
Query: 622 ctccggtctgttcttgatgttggatgtggagttgcaagctttggaggatatcttcttgct 681
|| ||| | || ||||||||||| ||||||||||| || ||||||| ||||||||| |
Sbjct: 244 ctgcggacagtgcttgatgttggctgtggagttgctagttttggagcttatcttctttca 303
Query: 682 tctgatgtgatagcaatgtcattagcaccaaatgatgttcatcaaaaccaaatccagttt 741
||| || | || |||||||| || ||||| || ||||| ||||| || || || || |||
Sbjct: 304 tctaatatcattgcaatgtctttggcacccaacgatgtgcatcagaatcagattcaattt 363
Query: 742 gctttagagagagggataccggcatatcttggtgtgttaggtaccctgagactcccttac 801
||| |||| ||||| || || |||||||||||||| || || || |||||| ||||||
Sbjct: 364 gctctagaaagaggaattcctgcatatcttggtgtcttgggaactaagagacttccttac 423
Query: 802 cccagtagatcttttgaacttgctcattgttctcgctgtcgaattgattggcttcagaga 861
|| || ||||||||||||||||| || ||||||||||| || ||||||||| |||| |||
Sbjct: 424 ccaagcagatcttttgaacttgcacactgttctcgctgccggattgattggattcaaaga 483
Query: 862 gatggcatgctactccttgagttggataggctactcaggccaggaggttactttgtatac 921
||||| || || ||||||||| | || || | || |||| |||||||| |||| ||||
Sbjct: 484 gatggaatacttctccttgagctagaccggttgcttcggccgggaggttattttgcatac 543
Query: 922 tcatctcctgaagcatatg 940
|| ||||| ||||||||||
Sbjct: 544 tcgtctccagaagcatatg 562
>gnl|LJGI|TC74821 weakly similar to UniRef100_A7Q1R5 Cluster: Chromosome chr7
scaffold_44, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_44, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 590
Score = 95.6 bits (48), Expect = 9e-19
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 1599 agaggatttattgattgagatggatagaattctgaggccaaaaggtttcatcattgtcca 1658
|||||||||||||||||||||||||||||| || | |||||||||||| ||||||||||
Sbjct: 6 agaggatttattgattgagatggatagaatcctccgaccaaaaggtttcgtcattgtcca 65
Query: 1659 tgataagaagtcagtggtggagcttataaagaagtatttgccagcattacactgggaggc 1718
|||||| ||| ||||| | ||||||||||| ||||||||||| |||||| | ||
Sbjct: 66 cgataagcggtcggtggtattgtctataaagaagttcttgccagcattgcactggcaagc 125
Query: 1719 agtg 1722
||||
Sbjct: 126 agtg 129
>gnl|LJGI|TC73352
Length = 672
Score = 73.8 bits (37), Expect = 3e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 970 agaaaaatgagtgctcttgttgagcggatgtgctggaaaattgctgctaagaa 1022
||||||| |||||||||| |||||| ||||||| |||||||||||||||||||
Sbjct: 600 agaaaaacgagtgctcttattgagcagatgtgcaggaaaattgctgctaagaa 548
>gnl|LJGI|TC76078 similar to UniRef100_A7NXD1 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 708
Score = 61.9 bits (31), Expect = 1e-08
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 215 ttgtaccaaagagctttccagtatgtgatgatagtttatctgagctgattccgtgcttgg 274
|||| |||||||| || || || ||||||||| || | |||||| ||||||| |||||||
Sbjct: 569 ttgttccaaagagtttccctgtttgtgatgatcgtctttctgagttgattccctgcttgg 628
Query: 275 atagaaacctcatataccaaacaagattgaagcttgatttgtctttgatggagcactatg 334
||||| |||| || || |||| | ||||||| || ||||| ||||||| |||||||
Sbjct: 629 atagacaccttatctatcaaatgcggatgaagctggacctgtctgtgatggaacactatg 688
Query: 335 agagaca 341
|||||||
Sbjct: 689 agagaca 695
>gnl|LJGI|BP055480
Length = 238
Score = 56.0 bits (28), Expect = 8e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 524 ctggtggaggaacccacttccattatggtgctgata 559
|||||||||||||||||||| ||||| |||||||||
Sbjct: 21 ctggtggaggaacccacttctattatagtgctgata 56
>gnl|LJGI|BP062727 similar to UniRef100_A7QT88 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 478
Score = 54.0 bits (27), Expect = 3e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 996 gatgtgctggaaaattgctgctaagaa 1022
|||||||||||||||||||||||||||
Sbjct: 18 gatgtgctggaaaattgctgctaagaa 44