Miyakogusa Predicted Gene
- Lj1g3v4485290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4485290.1 tr|F1NAJ8|F1NAJ8_CHICK Tudor domain-containing
protein 3 OS=Gallus gallus GN=TDRD3 PE=4 SV=1,38.56,1e-18,GB DEF:
HYPOTHETICAL PROTEIN AT5G19950,NULL; FAMILY NOT NAMED,NULL;
DUF1767,Domain of unknown functi,CUFF.32494.1
(1128 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP038776 similar to UniRef100_A7PEW3 Cluster: Chromosom... 957 0.0
gnl|LJGI|BP081696 similar to UniRef100_A7PEW2 Cluster: Chromosom... 248 6e-65
>gnl|LJGI|BP038776 similar to UniRef100_A7PEW3 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 490
Score = 957 bits (483), Expect = 0.0
Identities = 486/487 (99%)
Strand = Plus / Plus
Query: 1 atggaggagaattcgcggagtgtttcagaggcaggaacggtggtgttagaaaccctaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atggaggagaattcgcggagtgtttcagaggcaggaacggtggtgttagaaaccctaaga 63
Query: 61 ggaagaggttggtgtttggaagacacagaccaattgaaagccatcatcgttattcaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ggaagaggttggtgtttggaagacacagaccaattgaaagccatcatcgttattcaatct 123
Query: 121 gcacttgccgatgaccgttccaaggtggtagatttcgttgaatcggagcttctcaattcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gcacttgccgatgaccgttccaaggtggtagatttcgttgaatcggagcttctcaattcg 183
Query: 181 gaccttagatccatcggagccaagtccttgccccatccctctcttcttcgcaacccttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gaccttagatccatcggagccaagtccttgccccatccctctcttcttcgcaacccttct 243
Query: 241 tcgcatcttctcggccccaaagtccttcagatatcttcagtgagggacatttctaagagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tcgcatcttctcggccccaaagtccttcagatatcttcagtgagggacatttctaagagc 303
Query: 301 agtgtgggtggaagttcgggtggccggagacttcttagactatgtcttactgatggtcac 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agtgtgggtggaaattcgggtggccggagacttcttagactatgtcttactgatggtcac 363
Query: 361 tccgagatcactgctgtagagtattctcacattccagttatacccgatgatgtggttccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tccgagatcactgctgtagagtattctcacattccagttatacccgatgatgtggttccg 423
Query: 421 ggtactaagattcgtttggaaaataaagttgcggttcatagtggcatagcttgcttaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ggtactaagattcgtttggaaaataaagttgcggttcatagtggcatagcttgcttaaat 483
Query: 481 cctaaag 487
|||||||
Sbjct: 484 cctaaag 490
>gnl|LJGI|BP081696 similar to UniRef100_A7PEW2 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 370
Score = 248 bits (125), Expect = 6e-65
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 1004 agccttctattaaagacgatgttgtagatgttagtcgtgatgaggatcttgcttggcagc 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agccttctattaaagacgatgttgtagatgttagtcgtgatgaggatcttgcttggcagc 311
Query: 1064 ttcagaatcaatttaaccttgaagattctggggtacaaaggggttctcaggaaactaagg 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttcagaatcaatttaaccttgaagattctggggtacaaaggggttctcaggaaactaagg 251
Query: 1124 cacag 1128
|||||
Sbjct: 250 cacag 246