Miyakogusa Predicted Gene

Lj1g3v4483820.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4483820.1 Non Chatacterized Hit- tr|A5BM65|A5BM65_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,28.06,0.0000000004,seg,NULL; DUF761,Protein of unknown function
DUF761, plant,CUFF.32475.1
         (585 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO025344 UniRef100_O44416 Cluster: Special lobe-specifi...   589   e-168

>gnl|LJGI|GO025344 UniRef100_O44416 Cluster: Special lobe-specific silk protein
           ssp160; n=1; Chironomus thummi|Rep: Special, partial
           (2%)
          Length = 560

 Score =  589 bits (297), Expect = e-168
 Identities = 297/297 (100%)
 Strand = Plus / Plus

                                                                       
Query: 170 gggtgactcccaagttccttgctgcgaggcgttttcgctgcaaaagatcatcaacctcta 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gggtgactcccaagttccttgctgcgaggcgttttcgctgcaaaagatcatcaacctcta 323

                                                                       
Query: 230 ccaaaagggccatatacaggttccacaaagagcctgcacctgtgtacattgataagcttt 289
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccaaaagggccatatacaggttccacaaagagcctgcacctgtgtacattgataagcttt 383

                                                                       
Query: 290 ttaaagagccttcatgtgacttggtggagaatgggaagccacaattgacagcacaaaagc 349
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttaaagagccttcatgtgacttggtggagaatgggaagccacaattgacagcacaaaagc 443

                                                                       
Query: 350 cacgaactgagaagaatgcaaagctctcttcacagaaagggaaagaaggacctggaacta 409
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cacgaactgagaagaatgcaaagctctcttcacagaaagggaaagaaggacctggaacta 503

                                                                    
Query: 410 gtaaaggaggtggtggatctgatcacaagccctgtgcttcagatgatatgtgggagt 466
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtaaaggaggtggtggatctgatcacaagccctgtgcttcagatgatatgtgggagt 560



 Score =  274 bits (138), Expect = 6e-73
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcctgcataagtctaaggcttccaccagccagaaagatatggaagagcttgatcacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  atgtcctgcataagtctaaggcttccaccagccagaaagatatggaagagcttgatcacc 154

                                                                       
Query: 61  tccacacttggcaaacttcacaagattcgtaggtccaattccaaagccatgaagaaaccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tccacacttggcaaacttcacaagattcgtaggtccaattccaaagccatgaagaaaccc 214

                             
Query: 121 agaaagcatatattaaaa 138
           ||||||||||||||||||
Sbjct: 215 agaaagcatatattaaaa 232