Miyakogusa Predicted Gene
- Lj1g3v4483790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4483790.1 Non Chatacterized Hit- tr|I3S1M0|I3S1M0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,Actin
depolymerizing proteins,NULL; seg,NULL; Actin depolymerisation
factor/cofilin -like,Actin-bind,CUFF.32472.1
(441 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62885 homologue to UniRef100_Q8SAG3 Cluster: Actin-de... 874 0.0
gnl|LJGI|TC63884 similar to UniRef100_Q9XEN2 Cluster: Actin depo... 147 7e-35
gnl|LJGI|GO012045 similar to UniRef100_Q8H9D5 Cluster: Actin dep... 125 2e-28
>gnl|LJGI|TC62885 homologue to UniRef100_Q8SAG3 Cluster: Actin-depolymerizing factor;
n=1; Vitis vinifera|Rep: Actin-depolymerizing factor -
Vitis vinifera (Grape), complete
Length = 945
Score = 874 bits (441), Expect = 0.0
Identities = 441/441 (100%)
Strand = Plus / Plus
Query: 1 atgtctttcagaggattcggccgggcgaatgcttcatcaggcatgggtgttgctgatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atgtctttcagaggattcggccgggcgaatgcttcatcaggcatgggtgttgctgatcac 182
Query: 61 agcaagaacaccttcatggagttgaagcaaaagaaggttcatcggtatgtgatctttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agcaagaacaccttcatggagttgaagcaaaagaaggttcatcggtatgtgatctttaag 242
Query: 121 gttgatgagaagaaaagggaggttgtggttgagaagactggtggcccggctgagagctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gttgatgagaagaaaagggaggttgtggttgagaagactggtggcccggctgagagctat 302
Query: 181 gacgatttcgcggcgtctttgcctgagaatgattgtagatatgctgtgtttgactttgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gacgatttcgcggcgtctttgcctgagaatgattgtagatatgctgtgtttgactttgat 362
Query: 241 tttgttacttctgagaattgtcaaaagagcaaaatcttcttcattgcatggtctccttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttgttacttctgagaattgtcaaaagagcaaaatcttcttcattgcatggtctccttca 422
Query: 301 acatctcgaatccgagccaagatgctctatgccactactaaagaaaggttcagacgtgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 acatctcgaatccgagccaagatgctctatgccactactaaagaaaggttcagacgtgag 482
Query: 361 ctagatggtgttcattatgaaatccaggctactgaccccacagaaatggatcttgaagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctagatggtgttcattatgaaatccaggctactgaccccacagaaatggatcttgaagtg 542
Query: 421 atcaaagaccgagcacattga 441
|||||||||||||||||||||
Sbjct: 543 atcaaagaccgagcacattga 563
>gnl|LJGI|TC63884 similar to UniRef100_Q9XEN2 Cluster: Actin depolymerizing factor;
n=2; Populus|Rep: Actin depolymerizing factor - Populus
tremula x Populus alba, complete
Length = 852
Score = 147 bits (74), Expect = 7e-35
Identities = 152/178 (85%)
Strand = Plus / Plus
Query: 122 ttgatgagaagaaaagggaggttgtggttgagaagactggtggcccggctgagagctatg 181
|||||||||| || | ||||||||||| || || ||||| |||| |||||||||||||
Sbjct: 205 ttgatgagaataagaaagaggttgtggtcgaaaaaactggaagccctgctgagagctatg 264
Query: 182 acgatttcgcggcgtctttgcctgagaatgattgtagatatgctgtgtttgactttgatt 241
| |||||| | || || ||||||||||| ||||| ||||||||||| ||||||||||| |
Sbjct: 265 aagatttcactgcatccttgcctgagaacgattgcagatatgctgtctttgactttgact 324
Query: 242 ttgttacttctgagaattgtcaaaagagcaaaatcttcttcattgcatggtctccttc 299
|||| || ||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 325 ttgtgacacctgagaactgccaaaagagcaaaatcttttttattgcatggtctccttc 382
>gnl|LJGI|GO012045 similar to UniRef100_Q8H9D5 Cluster: Actin depolymerizing factor 6;
n=1; Solanum tuberosum|Rep: Actin depolymerizing factor
6 - Solanum tuberosum (Potato), partial (67%)
Length = 666
Score = 125 bits (63), Expect = 2e-28
Identities = 145/171 (84%), Gaps = 1/171 (0%)
Strand = Plus / Plus
Query: 122 ttgatgagaagaaaagggaggttgtggttgagaagactggtggcccggctgagagctatg 181
|||||||||| || | ||||||||||| || || ||||| |||| |||||||||||||
Sbjct: 168 ttgatgagaataagaaagaggttgtggtcgaaaaaactggaagccctgctgagagctatg 227
Query: 182 acgatttcgcggcgtctttgcctgagaatgattgtagatatgctgtgtttgactttgatt 241
| |||||| | || || ||||||||||| ||||| ||||||||||| ||||||||||| |
Sbjct: 228 aagatttcactgcatccttgcctgagaacgattgcagatatgctgtctttgactttgact 287
Query: 242 ttgttacttctgagaattgtcaaaagagcaaaatcttcttcattgcatggt 292
|||| || ||||||| || ||||||||||||||||| || ||||||||||
Sbjct: 288 ttgtgacacctgagaactgccaaaagagcaaaatctt-tttattgcatggt 337