Miyakogusa Predicted Gene
- Lj1g3v4480290.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4480290.2 tr|Q25BJ5|Q25BJ5_BRAOL Basic helix-loop-helix
(BHLH) family transcription factor OS=Brassica
olerace,31.3,1e-18,seg,NULL; bHLH-MYC_N,Transcription factor MYC/MYB
N-terminal; EGL3 (ENHANCER OF GLABRA3), DNA BINDIN,CUFF.32504.2
(705 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81133 similar to UniRef100_A7PUP8 Cluster: Chromosome... 916 0.0
gnl|LJGI|TC66277 similar to UniRef100_Q41102 Cluster: Phaseolin ... 66 3e-10
>gnl|LJGI|TC81133 similar to UniRef100_A7PUP8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 604
Score = 916 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Plus
Query: 244 gttttggatatggtcagggcaacatttggggaatctagttctgcacagggaaaggtgtta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gttttggatatggtcagggcaacatttggggaatctagttctgcacagggaaaggtgtta 62
Query: 304 ccgaagattttcgggcatgagttaagccttggagatacaaaatctcagtccataactatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ccgaagattttcgggcatgagttaagccttggagatacaaaatctcagtccataactatt 122
Query: 364 agtttctctcctaaggtggaagatgattctggtttcacttctgactcgtatgaagttcaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 agtttctctcctaaggtggaagatgattctggtttcacttctgactcgtatgaagttcaa 182
Query: 424 gcgctgggggtaaaccatgcttatgggaattcgtccaatgggtgcataggagacggtgag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcgctgggggtaaaccatgcttatgggaattcgtccaatgggtgcataggagacggtgag 242
Query: 484 gcgaaaatgttccctcagttaaatcaaatgattcctgggaattttaatcctcaagctagg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gcgaaaatgttccctcagttaaatcaaatgattcctgggaattttaatcctcaagctagg 302
Query: 544 gtttctagtttagatttgggtaatgaagacgcgtcctcacctcatcttgatgaccggaag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtttctagtttagatttgggtaatgaagacgcgtcctcacctcatcttgatgaccggaag 362
Query: 604 cccagaaaaagagggagaaagcctgccaatgggagagaggaaccactgaatcatgttgaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cccagaaaaagagggagaaagcctgccaatgggagagaggaaccactgaatcatgttgaa 422
Query: 664 gccgagaggcaaagacgggagaagcttaaccagagattttat 705
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gccgagaggcaaagacgggagaagcttaaccagagattttat 464
>gnl|LJGI|TC66277 similar to UniRef100_Q41102 Cluster: Phaseolin G-box binding
protein PG2; n=1; Phaseolus vulgaris|Rep: Phaseolin
G-box binding protein PG2 - Phaseolus vulgaris (Kidney
bean) (French bean), partial (40%)
Length = 1350
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 637 agagaggaaccactgaatcatgttgaagccgagaggcaaagacgggagaagcttaaccag 696
||||||||||| |||| || |||||||| |||||||| || |||||||||||||||||
Sbjct: 351 agagaggaaccgttgaaccacgttgaagcagagaggcagaggagggagaagcttaaccag 410
Query: 697 agatt 701
|||||
Sbjct: 411 agatt 415