Miyakogusa Predicted Gene
- Lj1g3v4454670.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4454670.1 Non Chatacterized Hit- tr|I1PGB5|I1PGB5_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,44.76,6e-18,ZF_RING_2,Zinc finger, RING-type; seg,NULL;
RING/U-box,NULL; RING FINGER PROTEIN,NULL; no descriptio,CUFF.32543.1
(1290 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB828534 similar to UniRef100_Q94AY3 Cluster: At2g30580... 944 0.0
gnl|LJGI|DC594315 similar to UniRef100_A7PUM6 Cluster: Chromosom... 476 e-133
gnl|LJGI|TC63288 weakly similar to UniRef100_A7QVP5 Cluster: Chr... 119 5e-26
gnl|LJGI|BP061718 115 7e-25
gnl|LJGI|TC62720 similar to UniRef100_A7QVP5 Cluster: Chromosome... 94 3e-18
>gnl|LJGI|CB828534 similar to UniRef100_Q94AY3 Cluster: At2g30580/T6B20.7; n=1;
Arabidopsis thaliana|Rep: At2g30580/T6B20.7 -
Arabidopsis thaliana (Mouse-ear cress), partial (7%)
Length = 483
Score = 944 bits (476), Expect = 0.0
Identities = 479/480 (99%)
Strand = Plus / Plus
Query: 397 acaaaacctacaagaaaggctagtggtctgcggtcctctagtttttccatcgaaaagccc 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaaaacctacaagaaaggctagtggtctgcggtcctctagtttttccatcgaaaagccc 60
Query: 457 attaaaaaagaggaagtatcaggagatcatcctgagagttcaagctcgcgggacacttca 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attaaaaaagaggaagtatcaggagatcatcctgagagttcaagctcgcgggacacttca 120
Query: 517 aataagcttcctcagaatactgaacagagttcgtcaccttgcggcggtagtcaatccaaa 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aataagcttcctcagaatactgaacagagttcgtcaccttgcggcggtagtcaatccaaa 180
Query: 577 cccaataaagaatcagagaatagtgccgaaccgtgggatgcaaaattggatctttggaaa 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccaataaagaatcagagaatagtgccgaaccgtgggatgcaaaattggatctttggaaa 240
Query: 637 cctttgaattttttagtagaggttgctagtaggagtaaatctttcaagtctaatgcgcaa 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctttgaattttttagtagaggttgctagtaggagtaaatctttcaagtctaatgcgcaa 300
Query: 697 gggtctgatgctaagctagaacccattccagtaaatgagagtgactctcaagtgcagaaa 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggtctgatgctaagctagaacccattccagtaaatgagagtgactctcaagtgcagaaa 360
Query: 757 accaaaaataaggaaaataaacgcaaggcaaaagttgagaatgaaaggattagccctcat 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accaaaaataaggaaaataaacgcaaggcaaaagttgagaatgaaaggattagccctcat 420
Query: 817 cttgtctcttcagatacatcaaaacctaataagttgcgcagaatacggaagaaaaaggag 876
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 421 cttgtctcttcagatacatcaaaacctaataagttgcgcagaatccggaagaaaaaggag 480
>gnl|LJGI|DC594315 similar to UniRef100_A7PUM6 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 589
Score = 476 bits (240), Expect = e-133
Identities = 240/240 (100%)
Strand = Plus / Plus
Query: 1 atgccgaatccggtggtgaaggtgaggtggaacacgattgcagcatgcatgacttgccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 atgccgaatccggtggtgaaggtgaggtggaacacgattgcagcatgcatgacttgccca 409
Query: 61 ctctgcaacaagctattcaaagaagccactaccatatcagagtgtcttcacacgttttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctctgcaacaagctattcaaagaagccactaccatatcagagtgtcttcacacgttttgc 469
Query: 121 aggaagtgcatttatgataaactttcagatgaggaattggaatgctgtccaatttgcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aggaagtgcatttatgataaactttcagatgaggaattggaatgctgtccaatttgcaac 529
Query: 181 attgatttgggctgtgttccacttgagaaactgaggccagaccacaatttgcaagatatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 attgatttgggctgtgttccacttgagaaactgaggccagaccacaatttgcaagatatg 589
>gnl|LJGI|TC63288 weakly similar to UniRef100_A7QVP5 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (63%)
Length = 1636
Score = 119 bits (60), Expect = 5e-26
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 106 cttcacacgttttgcaggaagtgcatttatgataaactttcagatgaggaattggaatgc 165
|||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||| |||
Sbjct: 301 cttcacaccttttgcaggaagtgcatatatgagaaactttcagatgaggagatggattgc 360
Query: 166 tgtccaatttgcaacattgatttgggctgtgttccacttgagaaactgaggccagaccac 225
|||||| | ||||| |||||| |||| || | || | || || || ||||| ||||||
Sbjct: 361 tgtccagtatgcaatattgatctggggtgcatggcagtggaaaagctcaggcctgaccac 420
Query: 226 aatttgcaagatatgagggccaaa 249
||||||||||||||||||||||||
Sbjct: 421 aatttgcaagatatgagggccaaa 444
>gnl|LJGI|BP061718
Length = 314
Score = 115 bits (58), Expect = 7e-25
Identities = 58/58 (100%)
Strand = Plus / Minus
Query: 1233 agcaaaggattttgtcatggtcctggcttatgctcggaaggtttcacacccttgatga 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agcaaaggattttgtcatggtcctggcttatgctcggaaggtttcacacccttgatga 257
>gnl|LJGI|TC62720 similar to UniRef100_A7QVP5 Cluster: Chromosome chr14 scaffold_190,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_190, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1018
Score = 93.7 bits (47), Expect = 3e-18
Identities = 110/131 (83%)
Strand = Plus / Plus
Query: 106 cttcacacgttttgcaggaagtgcatttatgataaactttcagatgaggaattggaatgc 165
||||| || ||||||||||| ||||||||||| || || ||||||||||| | || |||
Sbjct: 378 cttcataccttttgcaggaaatgcatttatgagaagctctcagatgaggagtctgattgc 437
Query: 166 tgtccaatttgcaacattgatttgggctgtgttccacttgagaaactgaggccagaccac 225
|||||| | ||||| |||||| | || ||||||||| | || ||||| ||| ||||||||
Sbjct: 438 tgtccagtgtgcaatattgatctaggatgtgttccagtggaaaaactcagggcagaccac 497
Query: 226 aatttgcaaga 236
|||||||||||
Sbjct: 498 aatttgcaaga 508