Miyakogusa Predicted Gene
- Lj1g3v4453640.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4453640.2 Non Chatacterized Hit- tr|C5X189|C5X189_SORBI
Putative uncharacterized protein Sb01g008500
OS=Sorghu,71.34,0,CorA,Mg2+ transporter protein, CorA-like/Zinc
transport protein ZntB; SUBFAMILY NOT NAMED,NULL; RNA ,CUFF.32541.2
(513 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78069 similar to UniRef100_A7NX02 Cluster: Chromosome... 975 0.0
gnl|LJGI|TC64760 similar to UniRef100_A7PUM5 Cluster: Chromosome... 406 e-113
gnl|LJGI|TC77961 similar to UniRef100_A7PUM5 Cluster: Chromosome... 246 1e-64
gnl|LJGI|TC78457 homologue to UniRef100_A7QFY6 Cluster: Chromoso... 54 9e-07
>gnl|LJGI|TC78069 similar to UniRef100_A7NX02 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (81%)
Length = 1551
Score = 975 bits (492), Expect = 0.0
Identities = 508/513 (99%), Gaps = 4/513 (0%)
Strand = Plus / Plus
Query: 1 atggctgaactttacttatcaagaaagtttgctgcttcatcctctcccacaagtagctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 atggctgaactttacttatcaagaaagtttgctgcttcatcctctcccacaagtagctct 906
Query: 61 tgtgatcccaaatggcttcatagctccccaaatccagattcagagatacataatatatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 tgtgatcccaaatggcttcatagctccccaaatccagattcagagatacataatatatca 966
Query: 121 aataaaacaagtacaacaacagttgaaggagataatgatgttgaggagctcgaaatgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 aataaaacaagtacaacaacagttgaaggagataatgatgttgaggagctcgaaatgtta 1026
Query: 181 cttgaggcctatttcatgcaaattgatggaacattaaacaaactgaaaacactgcgggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 cttgaggcctatttcatgcaaattgatggaacattaaacaaactgaaaacactgcgggag 1086
Query: 241 tatattgatgacacggaagattacatcaacatacaacttgacaatcaccgaaatcaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 tatattgatgacacggaagattacatcaacatacaacttgacaatcaccgaaatcaactg 1146
Query: 301 attcagctagagctcttcctcagttctgggactgtttctctgtccatatgttcattggtg 360
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 attc----agagctcttcctcagttctgggactgtttctctgtccatatgttcattggtg 1202
Query: 361 gcagcaatatttggtatgaacattccatatacatggagagaaggtcacggatatatattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 gcagcaatatttggtatgaacattccatatacatggagagaaggtcacggatatatattc 1262
Query: 421 aaatgggtggttatctttgctggaatggtttgtgcatccttgtttttatccatagcagct 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1263 aaatgggtggttatctttgctggaatggtttgtgcatccttgtttttgtccatagcagct 1322
Query: 481 tatgccagacgcaaaggccttgttgggtcttga 513
|||||||||||||||||||||||||||||||||
Sbjct: 1323 tatgccagacgcaaaggccttgttgggtcttga 1355
>gnl|LJGI|TC64760 similar to UniRef100_A7PUM5 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 676
Score = 406 bits (205), Expect = e-113
Identities = 208/209 (99%)
Strand = Plus / Plus
Query: 305 agctagagctcttcctcagttctgggactgtttctctgtccatatgttcattggtggcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 agctagagctcttcctcagttctgggactgtttctctgtccatatgttcattggtggcag 327
Query: 365 caatatttggtatgaacattccatatacatggagagaaggtcacggatatatattcaaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 caatatttggtatgaacattccatatacatggagagaaggtcacggatatatattcaaat 387
Query: 425 gggtggttatctttgctggaatggtttgtgcatccttgtttttatccatagcagcttatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gggtggttatctttgctggaatggtttgtgcatccttgtttttatccatagcagcttatg 447
Query: 485 ccagacgcaaaggccttgttgggtcttga 513
|||||||| ||||||||||||||||||||
Sbjct: 448 ccagacgccaaggccttgttgggtcttga 476
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 272 tacaacttgacaatcaccgaaatcaactgattcag 306
|||| ||||||||||||||||||||||||||||||
Sbjct: 85 tacagcttgacaatcaccgaaatcaactgattcag 119
>gnl|LJGI|TC77961 similar to UniRef100_A7PUM5 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1420
Score = 246 bits (124), Expect = 1e-64
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 305 agctagagctcttcctcagttctgggactgtttctctgtccatatgttcattggtggcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agctagagctcttcctcagttctgggactgtttctctgtccatatgttcattggtggcag 508
Query: 365 caatatttggtatgaacattccatatacatggagagaaggtcacggatatatattcaaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 caatatttggtatgaacattccatatacatggagagaaggtcacggatatatattcaaat 568
Query: 425 gggt 428
||||
Sbjct: 569 gggt 572
Score = 174 bits (88), Expect = 3e-43
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 426 ggtggttatctttgctggaatggtttgtgcatccttgtttttatccatagcagcttatgc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ggtggttatctttgctggaatggtttgtgcatccttgtttttatccatagcagcttatgc 770
Query: 486 cagacgcaaaggccttgttgggtcttga 513
||||||||||||||||||||||||||||
Sbjct: 771 cagacgcaaaggccttgttgggtcttga 798
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 246 tgatgacacggaagattacatcaacatacaa 276
|||||||||||||||||||||||||||||||
Sbjct: 1 tgatgacacggaagattacatcaacatacaa 31
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 272 tacaacttgacaatcaccgaaatcaactgattcag 306
|||| ||||||||||||||||||||||||||||||
Sbjct: 266 tacagcttgacaatcaccgaaatcaactgattcag 300
>gnl|LJGI|TC78457 homologue to UniRef100_A7QFY6 Cluster: Chromosome chr9 scaffold_90,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_90, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 698
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 244 attgatgacacggaagattacatcaacatacaact 278
||||||||||||||||||| ||||||||| |||||
Sbjct: 69 attgatgacacggaagatttcatcaacattcaact 103