Miyakogusa Predicted Gene
- Lj1g3v4452590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4452590.1 CUFF.32538.1
(450 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78069 similar to UniRef100_A7NX02 Cluster: Chromosome... 886 0.0
gnl|LJGI|TC77961 similar to UniRef100_A7PUM5 Cluster: Chromosome... 147 7e-35
gnl|LJGI|TC64760 similar to UniRef100_A7PUM5 Cluster: Chromosome... 147 7e-35
gnl|LJGI|TC78457 homologue to UniRef100_A7QFY6 Cluster: Chromoso... 54 8e-07
>gnl|LJGI|TC78069 similar to UniRef100_A7NX02 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (81%)
Length = 1551
Score = 886 bits (447), Expect = 0.0
Identities = 447/447 (100%)
Strand = Plus / Plus
Query: 4 acaaggttaacaaatcgagttcaaaagataagagatgaactagaaaacctacttgatgac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 acaaggttaacaaatcgagttcaaaagataagagatgaactagaaaacctacttgatgac 837
Query: 64 gatgatgacatggctgaactttacttatcaagaaagtttgctgcttcatcctctcccaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 gatgatgacatggctgaactttacttatcaagaaagtttgctgcttcatcctctcccaca 897
Query: 124 agtagctcttgtgatcccaaatggcttcatagctccccaaatccagattcagagatacat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 agtagctcttgtgatcccaaatggcttcatagctccccaaatccagattcagagatacat 957
Query: 184 aatatatcaaataaaacaagtacaacaacagttgaaggagataatgatgttgaggagctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 aatatatcaaataaaacaagtacaacaacagttgaaggagataatgatgttgaggagctc 1017
Query: 244 gaaatgttacttgaggcctatttcatgcaaattgatggaacattaaacaaactgaaaaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 gaaatgttacttgaggcctatttcatgcaaattgatggaacattaaacaaactgaaaaca 1077
Query: 304 ctgcgggagtatattgatgacacggaagattacatcaacatacaacttgacaatcaccga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 ctgcgggagtatattgatgacacggaagattacatcaacatacaacttgacaatcaccga 1137
Query: 364 aatcaactgattcagagctcttcctcagttctgggactgtttctctgtccatatgttcat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1138 aatcaactgattcagagctcttcctcagttctgggactgtttctctgtccatatgttcat 1197
Query: 424 tggtggcagcaatatttggtatgaaca 450
|||||||||||||||||||||||||||
Sbjct: 1198 tggtggcagcaatatttggtatgaaca 1224
>gnl|LJGI|TC77961 similar to UniRef100_A7PUM5 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1420
Score = 147 bits (74), Expect = 7e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 377 agagctcttcctcagttctgggactgtttctctgtccatatgttcattggtggcagcaat 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agagctcttcctcagttctgggactgtttctctgtccatatgttcattggtggcagcaat 512
Query: 437 atttggtatgaaca 450
||||||||||||||
Sbjct: 513 atttggtatgaaca 526
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 318 tgatgacacggaagattacatcaacatacaa 348
|||||||||||||||||||||||||||||||
Sbjct: 1 tgatgacacggaagattacatcaacatacaa 31
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 344 tacaacttgacaatcaccgaaatcaactgattcag 378
|||| ||||||||||||||||||||||||||||||
Sbjct: 266 tacagcttgacaatcaccgaaatcaactgattcag 300
>gnl|LJGI|TC64760 similar to UniRef100_A7PUM5 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 676
Score = 147 bits (74), Expect = 7e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 377 agagctcttcctcagttctgggactgtttctctgtccatatgttcattggtggcagcaat 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agagctcttcctcagttctgggactgtttctctgtccatatgttcattggtggcagcaat 331
Query: 437 atttggtatgaaca 450
||||||||||||||
Sbjct: 332 atttggtatgaaca 345
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 344 tacaacttgacaatcaccgaaatcaactgattcag 378
|||| ||||||||||||||||||||||||||||||
Sbjct: 85 tacagcttgacaatcaccgaaatcaactgattcag 119
>gnl|LJGI|TC78457 homologue to UniRef100_A7QFY6 Cluster: Chromosome chr9 scaffold_90,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_90, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 698
Score = 54.0 bits (27), Expect = 8e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 316 attgatgacacggaagattacatcaacatacaact 350
||||||||||||||||||| ||||||||| |||||
Sbjct: 69 attgatgacacggaagatttcatcaacattcaact 103