Miyakogusa Predicted Gene
- Lj1g3v4450310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4450310.1 tr|I0YVK3|I0YVK3_9CHLO Vacuolar ATP synthase
(Fragment) OS=Coccomyxa subellipsoidea C-169 PE=4 SV=1,71.43,4e-19,no
description,NULL; ATP-synt_F,ATPase, V1/A1 complex, subunit F;
SUBFAMILY NOT NAMED,NULL; VACUOLAR,CUFF.32414.1
(231 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62470 similar to UniRef100_A7LIT9 Cluster: Vacuolar p... 456 e-128
gnl|LJGI|GO025698 similar to UniRef100_A7LIT9 Cluster: Vacuolar ... 202 7e-52
gnl|LJGI|TC61719 similar to UniRef100_Q0JF69 Cluster: Os04g01375... 202 7e-52
>gnl|LJGI|TC62470 similar to UniRef100_A7LIT9 Cluster: Vacuolar proton pump subunit
F; n=1; Corchorus olitorius|Rep: Vacuolar proton pump
subunit F - Corchorus olitorius, complete
Length = 727
Score = 456 bits (230), Expect = e-128
Identities = 230/230 (100%)
Strand = Plus / Plus
Query: 1 atggccaacaaagctcaaattcggacaaataattccgcactcattgctatgattgcagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atggccaacaaagctcaaattcggacaaataattccgcactcattgctatgattgcagat 172
Query: 61 gaggacactgtggttgggtttctgctggctggagtgggtaatgttgacttgcgaaggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gaggacactgtggttgggtttctgctggctggagtgggtaatgttgacttgcgaaggaag 232
Query: 121 acaaattatctcattgtggattcaaaaacaactgtcaaacaaattgaagatgcattcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 acaaattatctcattgtggattcaaaaacaactgtcaaacaaattgaagatgcattcaaa 292
Query: 181 gagttcacaacaagggaagatattgcaatagtgttgataagtcaatatgt 230
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gagttcacaacaagggaagatattgcaatagtgttgataagtcaatatgt 342
>gnl|LJGI|GO025698 similar to UniRef100_A7LIT9 Cluster: Vacuolar proton pump subunit
F; n=1; Corchorus olitorius|Rep: Vacuolar proton pump
subunit F - Corchorus olitorius, complete
Length = 646
Score = 202 bits (102), Expect = 7e-52
Identities = 162/182 (89%)
Strand = Plus / Plus
Query: 49 atgattgcagatgaggacactgtggttgggtttctgctggctggagtgggtaatgttgac 108
||||||||||||||||| ||| | ||||| |||||||||||||| ||||| |||||||||
Sbjct: 301 atgattgcagatgaggatactatagttggctttctgctggctggtgtgggaaatgttgac 360
Query: 109 ttgcgaaggaagacaaattatctcattgtggattcaaaaacaactgtcaaacaaattgaa 168
| || ||||||| ||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 361 atacgtcggaagacgaattaccttattgtggattcaaaaacaactgtcaaacaaatcgag 420
Query: 169 gatgcattcaaagagttcacaacaagggaagatattgcaatagtgttgataagtcaatat 228
|||||||||||||| |||||||||||||| ||||||||||| ||| |||| |||||||||
Sbjct: 421 gatgcattcaaagaattcacaacaagggatgatattgcaattgtgctgattagtcaatat 480
Query: 229 gt 230
||
Sbjct: 481 gt 482
>gnl|LJGI|TC61719 similar to UniRef100_Q0JF69 Cluster: Os04g0137500 protein; n=1;
Oryza sativa Japonica Group|Rep: Os04g0137500 protein -
Oryza sativa subsp. japonica (Rice), partial (85%)
Length = 779
Score = 202 bits (102), Expect = 7e-52
Identities = 162/182 (89%)
Strand = Plus / Plus
Query: 49 atgattgcagatgaggacactgtggttgggtttctgctggctggagtgggtaatgttgac 108
||||||||||||||||| ||| | ||||| |||||||||||||| ||||| |||||||||
Sbjct: 149 atgattgcagatgaggatactatagttggctttctgctggctggtgtgggaaatgttgac 208
Query: 109 ttgcgaaggaagacaaattatctcattgtggattcaaaaacaactgtcaaacaaattgaa 168
| || ||||||| ||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 209 atacgtcggaagacgaattaccttattgtggattcaaaaacaactgtcaaacaaatcgag 268
Query: 169 gatgcattcaaagagttcacaacaagggaagatattgcaatagtgttgataagtcaatat 228
|||||||||||||| |||||||||||||| ||||||||||| ||| |||| |||||||||
Sbjct: 269 gatgcattcaaagaattcacaacaagggatgatattgcaattgtgctgattagtcaatat 328
Query: 229 gt 230
||
Sbjct: 329 gt 330