Miyakogusa Predicted Gene

Lj1g3v4450290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4450290.1 Non Chatacterized Hit- tr|H3HWB0|H3HWB0_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,29.21,0.00000005,Interferon-induced guanylate-binding protein
1 (GBP1), C-terminal domain,Guanylate-binding protein, ,CUFF.32397.1
         (1092 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75786 weakly similar to UniRef100_A7PUJ8 Cluster: Chr...   301   5e-81

>gnl|LJGI|TC75786 weakly similar to UniRef100_A7PUJ8 Cluster: Chromosome chr7
            scaffold_31, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 533

 Score =  301 bits (152), Expect = 5e-81
 Identities = 169/175 (96%)
 Strand = Plus / Plus

                                                                        
Query: 918  tgtttacagcccaatcctggatcttgacagatggtctattccccttggtgtaatagtttc 977
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tgtttacagcccnatcctggatcttgacagatggtctattccccttggtgtaatagtttc 60

                                                                        
Query: 978  atttttcatactttattggcggtgttgtgggaaaaggaaacatggatctgggtggctgtt 1037
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atttttcatactttattggcggtgttgtgggaaaaggaaacatggatctgggtggctgtt 120

                                                                   
Query: 1038 acctttgtacaacagcaataaaaatggtccaaatcggccaagaacagattaaagt 1092
            |||||||||| ||||| |||||||||||||||||||||| || ||||||| ||||
Sbjct: 121  acctttgtactacagccataaaaatggtccaaatcggcccagcacagattcaagt 175