Miyakogusa Predicted Gene
- Lj1g3v4449240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4449240.1 Non Chatacterized Hit- tr|I1NUV1|I1NUV1_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,37.31,0.081,seg,NULL,CUFF.32396.1
(333 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BG662410 660 0.0
gnl|LJGI|TC69845 309 6e-84
gnl|LJGI|FS328197 143 8e-34
gnl|LJGI|TC66124 143 8e-34
gnl|LJGI|DC599772 88 4e-17
gnl|LJGI|TC67973 homologue to UniRef100_Q8VAG3 Cluster: Wsv453; ... 80 1e-14
>gnl|LJGI|BG662410
Length = 506
Score = 660 bits (333), Expect = 0.0
Identities = 333/333 (100%)
Strand = Plus / Plus
Query: 1 atggtaaattcatttcctcctcagttccccaatacaaatgctaattttttaaattctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atggtaaattcatttcctcctcagttccccaatacaaatgctaattttttaaattctgaa 171
Query: 61 tttgaaagaactcagattcccaattcatctcctcatctacctcttttccttcttcttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tttgaaagaactcagattcccaattcatctcctcatctacctcttttccttcttcttcta 231
Query: 121 tctccattttccatgcctgcatcctctcaggtttctttggttgaaattttctttcccgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tctccattttccatgcctgcatcctctcaggtttctttggttgaaattttctttcccgtt 291
Query: 181 actccgctgcttcactggcaaggacgattttcagaggaactacagatttggcaaatcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 actccgctgcttcactggcaaggacgattttcagaggaactacagatttggcaaatcaat 351
Query: 241 acatttgtagcattactggacatatggccaattggagatcatgtgttaatggtggcagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 acatttgtagcattactggacatatggccaattggagatcatgtgttaatggtggcagaa 411
Query: 301 gctttaaatttcaaggatgcaggcccgtgagca 333
|||||||||||||||||||||||||||||||||
Sbjct: 412 gctttaaatttcaaggatgcaggcccgtgagca 444
>gnl|LJGI|TC69845
Length = 780
Score = 309 bits (156), Expect = 6e-84
Identities = 162/164 (98%)
Strand = Plus / Plus
Query: 153 ttctttggttgaaattttctttcccgttactccgctgcttcactggcaaggacgattttc 212
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 130 ttctttggttgaaattttctttcccgttactccgttgcttcactggcaaggacgattttc 189
Query: 213 agaggaactacagatttggcaaatcaatacatttgtagcattactggacatatggccaat 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 agaggaactacagatttggcaaatcaatacatttgtagcattactggacatatggccaat 249
Query: 273 tggagatcatgtgttaatggtggcagaagctttaaatttcaagg 316
||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 250 tggagatcatgtgttaatgatggcagaagctttaaatttcaagg 293
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 116 ttctatctccattttccatgcctgcatcctctcagg 151
||||||||||||||||||||||||||||||||||||
Sbjct: 23 ttctatctccattttccatgcctgcatcctctcagg 58
>gnl|LJGI|FS328197
Length = 726
Score = 143 bits (72), Expect = 8e-34
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 171 ctttcccgttactccgctgcttcactggcaaggacgattttcagaggaactacagatttg 230
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ctttcccgttactctgctgcttcactggcaaggacgattttcagaggaactacagatttg 658
Query: 231 gcaaatcaatacatttgtag 250
||| ||||||||||||||||
Sbjct: 659 gcagatcaatacatttgtag 678
>gnl|LJGI|TC66124
Length = 782
Score = 143 bits (72), Expect = 8e-34
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 171 ctttcccgttactccgctgcttcactggcaaggacgattttcagaggaactacagatttg 230
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctttcccgttactctgctgcttcactggcaaggacgattttcagaggaactacagatttg 359
Query: 231 gcaaatcaatacatttgtag 250
||| ||||||||||||||||
Sbjct: 360 gcagatcaatacatttgtag 379
>gnl|LJGI|DC599772
Length = 547
Score = 87.7 bits (44), Expect = 4e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 76 attcccaattcatctcctcatctacctcttttccttcttcttctatctccattttccatg 135
|||||||||| |||||||||||| |||||| | ||||||| ||||||| ||||||||||
Sbjct: 6 attcccaatttctctcctcatctatctctttcctttcttct-ctatctctattttccatg 64
Query: 136 cctgcatcctctcaggtttc 155
||||||||||| ||||||||
Sbjct: 65 cctgcatcctcccaggtttc 84
>gnl|LJGI|TC67973 homologue to UniRef100_Q8VAG3 Cluster: Wsv453; n=1; Shrimp white
spot syndrome virus|Rep: Wsv453 - White spot syndrome
virus (WSSV), partial (11%)
Length = 786
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 88 tctcctcatctacctcttttccttcttcttctatctccattttccatgcctgcatcctct 147
|||||||||||| |||||| | ||||||| ||||||| |||||||||||||||||||||
Sbjct: 2 tctcctcatctatctctttcctttcttct-ctatctctattttccatgcctgcatcctcc 60
Query: 148 caggtttc 155
||||||||
Sbjct: 61 caggtttc 68