Miyakogusa Predicted Gene
- Lj1g3v4447050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4447050.1 Non Chatacterized Hit- tr|I1JNX8|I1JNX8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.34902
PE,79.55,0,ZINC_FINGER_C2H2_1,Zinc finger, C2H2; SUBFAMILY NOT
NAMED,NULL; SERINE/THREONINE-PROTEIN KINASE RIO,,CUFF.32377.1
(771 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc fi... 121 7e-27
gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 119 3e-26
gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromoso... 94 2e-18
gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromos... 92 6e-18
gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 86 4e-16
gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc fing... 72 6e-12
gnl|LJGI|GO019772 similar to UniRef100_A7QBW4 Cluster: Chromosom... 70 2e-11
>gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (16%)
Length = 418
Score = 121 bits (61), Expect = 7e-27
Identities = 103/117 (88%)
Strand = Plus / Plus
Query: 436 aagcatggagagaagaagtggaaatgtgagaagtgctcaaagatatatgcggttcagtca 495
|||||||| |||||||||||||||||||| |||||||| |||| ||||| ||||| |||
Sbjct: 15 aagcatggtgagaagaagtggaaatgtgaaaagtgctccaagaagtatgcagttcaatca 74
Query: 496 gattggaaagctcactctaaaacttgtggtactaaagaatatagatgtgattgtgga 552
|| |||||||||||||| ||||| |||||||| | |||||| |||||||| ||||||
Sbjct: 75 gactggaaagctcactccaaaacctgtggtacaagagaatacagatgtgactgtgga 131
>gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 781
Score = 119 bits (60), Expect = 3e-26
Identities = 147/176 (83%)
Strand = Plus / Plus
Query: 430 tgcaggaagcatggagagaagaagtggaaatgtgagaagtgctcaaagatatatgcggtt 489
||||| || ||||| |||||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 416 tgcagaaaacatggcgagaagaagtggaaatgtgacaagtgctctaagaaatatgcggtt 475
Query: 490 cagtcagattggaaagctcactctaaaacttgtggtactaaagaatatagatgtgattgt 549
|| || ||||||||||||||||| || | ||| ||||| | ||| |||| ||| ||||||
Sbjct: 476 caatcggattggaaagctcactccaagatttgcggtaccagagagtataaatgcgattgt 535
Query: 550 ggaacccttttttccaggaaagacagtttcatcactcacagggcattctgtgatgc 605
||||| | ||||| |||| || || |||||||| || ||||| || ||||||||
Sbjct: 536 ggaactttgttttcaaggagggatagcttcatcacgcatagggcgttttgtgatgc 591
>gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1231
Score = 93.7 bits (47), Expect = 2e-18
Identities = 362/467 (77%)
Strand = Plus / Plus
Query: 151 agccttccaggaaatccagacccagatgctgaaatcattgctttgtctccaaaggcactc 210
||||| |||||||||||||| ||| ||||||| |||||||| | || |||| ||||
Sbjct: 454 agcctaccaggaaatccagatccaagtgctgaagtcattgctctatcaccaaccacacta 513
Query: 211 ctagccacaaatagatttgtttgtgagatctgcctcaagggtttccagagagatcagaac 270
| |||||||| | || || |||||||||||| ||| || || || ||||| || |||
Sbjct: 514 atggccacaaaccggttcgtgtgtgagatctgcaacaaaggctttcaaagagaccaaaac 573
Query: 271 ctccagcttcataggaggggccataacctcccttggaagctgaagcaaaggagcagcaaa 330
||||| |||||| || | ||||| ||||| || ||||||||||||||||| | || | |
Sbjct: 574 ctccaacttcatcggcgaggccacaacctgccgtggaagctgaagcaaagaaccaccgca 633
Query: 331 gaggttaaaaagaaagcgtacgtgtgccctgaaccttcttgcgttcaccacaatccatca 390
|||||| ||| | ||||| || ||||||||||| || || ||||||| || ||
Sbjct: 634 gaggttcggaagcgggtctacgtctgtcctgaaccttcatgtgtccaccacagcccggca 693
Query: 391 agggctctgggggatcttacaggaatcaagaaacattattgcaggaagcatggagagaag 450
|| || ||||| || || || || || ||||| || | ||||| ||||| || |||||
Sbjct: 694 agagcactgggcgacctcactggcattaagaagcacttctgcagaaagcacggcgagaaa 753
Query: 451 aagtggaaatgtgagaagtgctcaaagatatatgcggttcagtcagattggaaagctcac 510
|| ||||||||||| |||||||| |||| || || ||||| || || |||| ||| |||
Sbjct: 754 aaatggaaatgtgacaagtgctccaagaagtacgctgttcaatctgactggagagcacac 813
Query: 511 tctaaaacttgtggtactaaagaatatagatgtgattgtggaacccttttttccaggaaa 570
|| |||| ||||| || || ||||||| ||||| ||||||||| | |||||||| | |
Sbjct: 814 tccaaaatatgtggcacgaaggaatataagtgtgactgtggaaccatcttttccagaaga 873
Query: 571 gacagtttcatcactcacagggcattctgtgatgcattggctgaaga 617
|| ||||||||||| ||||| || ||||| || ||| || |||||||
Sbjct: 874 gatagtttcatcacccacagagctttctgcgacgcactgtctgaaga 920
>gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 589
Score = 91.7 bits (46), Expect = 6e-18
Identities = 169/210 (80%)
Strand = Plus / Plus
Query: 409 acaggaatcaagaaacattattgcaggaagcatggagagaagaagtggaaatgtgagaag 468
||||||||||||||||| | |||| || ||||| |||||||||||||| |||||||||
Sbjct: 338 acaggaatcaagaaacacttcagcagaaaacatggtgagaagaagtggaagtgtgagaag 397
Query: 469 tgctcaaagatatatgcggttcagtcagattggaaagctcactctaaaacttgtggtact 528
||||| |||| ||| || ||||| || |||||||| || || | || | |||||| |||
Sbjct: 398 tgctccaagaaatacgctgttcattccgattggaaggcccatgccaagatttgtgggact 457
Query: 529 aaagaatatagatgtgattgtggaacccttttttccaggaaagacagtttcatcactcac 588
| ||| || | ||||| ||||| || ||||| |||||||| ||||| ||||| |||||
Sbjct: 458 agagagtacaagtgtgactgtggcacacttttctccaggaaggacagcttcataactcat 517
Query: 589 agggcattctgtgatgcattggctgaagaa 618
|| || || ||||| | ||||||||||||
Sbjct: 518 agagctttttgtgacactttggctgaagaa 547
Score = 71.9 bits (36), Expect = 6e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 246 caagggtttccagagagatcagaacctccagcttcataggaggggccataacctcccttg 305
|||||| ||||||||||| |||||||| ||||| ||| || | || || ||||| |||||
Sbjct: 172 caaggggttccagagagaccagaacctgcagctgcatcggcgaggacacaacctgccttg 231
Query: 306 gaagctgaagcaaagg 321
||||||||||||||||
Sbjct: 232 gaagctgaagcaaagg 247
>gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 951
Score = 85.7 bits (43), Expect = 4e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 430 tgcaggaagcatggagagaagaagtggaaatgtgagaagtgctcaaagatatatgcggtt 489
||||| ||||| || ||||||||||||||||| ||||| ||||| |||| |||||| |||
Sbjct: 479 tgcagaaagcacggtgagaagaagtggaaatgcgagaaatgctccaagaaatatgcagtt 538
Query: 490 cagtcagattggaaagctcactc 512
|| || |||||||||||||||||
Sbjct: 539 caatctgattggaaagctcactc 561
>gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc finger, C2H2 type family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Zinc finger, C2H2 type family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(23%)
Length = 491
Score = 71.9 bits (36), Expect = 6e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 431 gcaggaagcatggagagaagaagtggaaatgtgagaagtgctcaaagatatatgcggttc 490
|||| ||||| || |||||||||||||| |||||||||||||| |||| ||| || || |
Sbjct: 245 gcagaaagcacggtgagaagaagtggaagtgtgagaagtgctccaagaaatacgcagtcc 186
Query: 491 agtcagattggaaagctcac 510
||||||||||||||||||
Sbjct: 185 catcagattggaaagctcac 166
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 253 ttccagagagatcagaacctccagcttcataggaggggccataacctcccttggaagct 311
||||||||||| ||||| |||||||| || || || ||||| |||||||| ||||||||
Sbjct: 423 ttccagagagaccagaatctccagctccacagaagaggccacaacctcccatggaagct 365
>gnl|LJGI|GO019772 similar to UniRef100_A7QBW4 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 618
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 531 agaatatagatgtgattgtggaacccttttttccaggaaagacagtttcatcactcacag 590
||||||||||||||||||||| ||||| || || ||| || |||||||||||||| ||
Sbjct: 289 agaatatagatgtgattgtggcaccctcttctcaaggcgtgatagtttcatcactcatag 348
Query: 591 ggcattctgtgatgc 605
||| |||||||||||
Sbjct: 349 ggccttctgtgatgc 363