Miyakogusa Predicted Gene

Lj1g3v4447030.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4447030.1 Non Chatacterized Hit- tr|K3ZUH5|K3ZUH5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si030256,54.55,2e-19,seg,NULL; HEAT STRESS TRANSCRIPTION
FACTOR,NULL; HEAT SHOCK TRANSCRIPTION FACTOR,NULL;
coiled-coil,N,CUFF.32374.1
         (356 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77725 similar to UniRef100_A7PUH3 Cluster: Chromosome...   688   0.0  

>gnl|LJGI|TC77725 similar to UniRef100_A7PUH3 Cluster: Chromosome chr7 scaffold_31,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_31, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (46%)
          Length = 1510

 Score =  688 bits (347), Expect = 0.0
 Identities = 356/358 (99%), Gaps = 2/358 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatggagcttgtgaagctcagacaccagcaacagaacacaagatcataccttcaagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 atgatggagcttgtgaagctcagacaccagcaacagaacacaagatcataccttcaagaa 245

                                                                       
Query: 61  atggaggaaaggttaagagggacagaaattaagcagcaacaaatgatggctttcttagct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atggaggaaaggttaagagggacagaaattaagcagcaacaaatgatggctttcttagct 305

                                                                       
Query: 121 agagcaatgcaaaatccagctttcattcagcagctactccaacagaagcagaagagaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agagcaatgcaaaatccagctttcattcagcagctactccaacagaagcagaagagaaag 365

                                                                       
Query: 181 gagcttgaagaggccatgactaagaagaggagaaggccaattgagcatggaacttgtgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gagcttgaagaggccatgactaagaagaggagaaggccaattgagcatggaacttgtgct 425

                                                                       
Query: 241 agtggtgttgggggatcaagaagcagtgttaaagttgaagttccagcttttggggaattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 agtggtgttgggggatcaagaagcagtgttaaagttgaagttccagcttttggggaattt 485

                                                                     
Query: 301 ggattcggtgtgtc--agctggaagtgttagccatggaaatgcaaggttttggtagag 356
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ggattcggtgtgtcagagctggaagtgttagccatggaaatgcaaggttttggtagag 543