Miyakogusa Predicted Gene

Lj1g3v4446660.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4446660.1 tr|A9SV66|A9SV66_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_188742,34.62,5e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Kelch motif,NULL; no description,Galactose
oxidase,,NODE_60282_length_971_cov_46.759010.path1.1
         (501 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60682 similar to UniRef100_Q9M1W7 Cluster: F-box/Kelc...   513   e-145

>gnl|LJGI|TC60682 similar to UniRef100_Q9M1W7 Cluster: F-box/Kelch-repeat protein
           At3g63220; n=2; Arabidopsis thaliana|Rep:
           F-box/Kelch-repeat protein At3g63220 - Arabidopsis
           thaliana (Mouse-ear cress), partial (20%)
          Length = 731

 Score =  513 bits (259), Expect = e-145
 Identities = 259/259 (100%)
 Strand = Plus / Plus

                                                                       
Query: 243 gcaggagaaagacgtgagaaaggttgtaggttcagcatccgagtttcgtaggagaattgg 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gcaggagaaagacgtgagaaaggttgtaggttcagcatccgagtttcgtaggagaattgg 60

                                                                       
Query: 303 gtttggaatgattggcctaggtaatgagttatacgtgattggaggcttcattggccctga 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtttggaatgattggcctaggtaatgagttatacgtgattggaggcttcattggccctga 120

                                                                       
Query: 363 cagattgaactgggaccttaagccattatccgatgttgatgttctcacacttgggaatga 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagattgaactgggaccttaagccattatccgatgttgatgttctcacacttgggaatga 180

                                                                       
Query: 423 gagaccaacttggcgccaggcagccccaatgacacggtgtcgcggtaccatttttggttg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagaccaacttggcgccaggcagccccaatgacacggtgtcgcggtaccatttttggttg 240

                              
Query: 483 tacactgctgagaatttag 501
           |||||||||||||||||||
Sbjct: 241 tacactgctgagaatttag 259