Miyakogusa Predicted Gene
- Lj1g3v4435510.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4435510.1 Non Chatacterized Hit- tr|I1J614|I1J614_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,87.78,0,DEAH_ATP_HELICASE,DNA/RNA helicase, ATP-dependent,
DEAH-box type, conserved site; ATP-DEPENDENT RNA ,gene.g36478.t1.1
(1746 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65544 similar to UniRef100_A7P496 Cluster: Chromosome... 1653 0.0
gnl|LJGI|TC67156 similar to UniRef100_A7P496 Cluster: Chromosome... 272 7e-72
gnl|LJGI|AV778401 147 3e-34
>gnl|LJGI|TC65544 similar to UniRef100_A7P496 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (40%)
Length = 1155
Score = 1653 bits (834), Expect = 0.0
Identities = 849/854 (99%)
Strand = Plus / Plus
Query: 893 tgccagagattaagcgctgcaacctttctaatgtcattttgcagcttaaggctttgggcg 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgccagagattaagcgctgcaacctttctaatgtcattttgcagcttaaggctttgggcg 61
Query: 953 ttgatgacatattagggtttgatttcattgagaaaccttcaagggcagctattataaaat 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttgatgacatattagggtttgatttcattgagaaaccttcaagggcagctattataaaat 121
Query: 1013 cattggagcagctatttttattaggtgctctaacagatgagtgccatctatctgatccag 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cattggagcagctatttttattaggtgctctaacagatgagtgccatctatctgatccag 181
Query: 1073 ttgggcgtcaaatggctcgactgcctttggatcctgtttatgccaaagctcttatttttg 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttgggcgtcaaatggctcgactgcctttggatcctgtttatgccaaagctcttatttttg 241
Query: 1133 ctagtcagtttaactgcttggaagagatgttgataactgttgcaatgctttctgtggaat 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctagtcagtttaactgcttggaagagatgttgataactgttgcaatgctttctgtggaat 301
Query: 1193 ccatattctatgttcctcgtgatatgttagcagagtcgagaattgcaacaaaatgcttct 1252
|||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 302 ccatattctatgctcctcgtgacaagttagaagagtcgagaattgcaacaaaatgcttct 361
Query: 1253 caagtccagagggagaccacatcactttgattaatgtgtatcgagcatctaatgatttct 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caagtccagagggagaccacatcactttgattaatgtgtatcgagcatctaatgatttct 421
Query: 1313 tggagaagagatcaatggaaatgagtaaaccaaaaagtgaaaaggttttgagaaaatggt 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tggagaagagatcaatggaaatgagtaaaccaaaaagtgaaaaggttttgagaaaatggt 481
Query: 1373 gcaaggaaaattttattaatagccgttctcttagacatgcttgtgacattcacaggcaga 1432
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 482 gcaaggaaaattttattaatagccgttctcttagacatgcttgtggcattcacaggcaga 541
Query: 1433 ttaagggacatgttcaacagatgggtctgaatcttgcttcctgtggagatgatatgcttc 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttaagggacatgttcaacagatgggtctgaatcttgcttcctgtggagatgatatgcttc 601
Query: 1493 aattccgcagatgccttgttgcttcctttttcctcaatgcagctataaagcagcctgatg 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aattccgcagatgccttgttgcttcctttttcctcaatgcagctataaagcagcctgatg 661
Query: 1553 gaacctacagggctttggccagtggtcaggtggtgcagatccacccttcttctgtattat 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaacctacagggctttggccagtggtcaggtggtgcagatccacccttcttctgtattat 721
Query: 1613 ttcggcaaaaaccagagtgtgtaatatttaacgaacttctccaaactaataacaagtatg 1672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ttcggcaaaaaccagagtgtgtaatatttaacgaacttctccaaactaataacaagtatg 781
Query: 1673 tccggaatttaactagagttgactacctatggttaactgaacttgctcctcagtactatg 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tccggaatttaactagagttgactacctatggttaactgaacttgctcctcagtactatg 841
Query: 1733 ccatgcagaactaa 1746
||||||||||||||
Sbjct: 842 ccatgcagaactaa 855
>gnl|LJGI|TC67156 similar to UniRef100_A7P496 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 706
Score = 272 bits (137), Expect = 7e-72
Identities = 143/145 (98%)
Strand = Plus / Plus
Query: 1 atgacagatggcttgcttctgagagaagcattgctggatccgtatctttctaagtattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atgacagatggcttgcttctgagagaagcattgctggatccgtatctttctaagtattct 621
Query: 61 gtcataatcgttgatgaagctcatgagagaactgtccatactgatgtgttgttgggcttg 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gtcataatcgtcgatgaagctcatgagagaactgtccatactgatgtgttgttgggcttg 681
Query: 121 ttgaaaaatgtgcaacttactcggt 145
||||||||||| |||||||||||||
Sbjct: 682 ttgaaaaatgtacaacttactcggt 706
>gnl|LJGI|AV778401
Length = 422
Score = 147 bits (74), Expect = 3e-34
Identities = 107/118 (90%)
Strand = Plus / Minus
Query: 1627 gagtgtgtaatatttaacgaacttctccaaactaataacaagtatgtccggaatttaact 1686
|||||||| ||||||| || |||||||| |||| || || ||||||||||| ||||||||
Sbjct: 418 gagtgtgtgatatttatcggacttctcccaactcattaccagtatgtccgggatttaact 359
Query: 1687 agagttgactacctatggttaactgaacttgctcctcagtactatgccatgcagaact 1744
|||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||
Sbjct: 358 agagttgactacctatggtttactgaacttgctcctccgtactatgccatgccgaact 301