Miyakogusa Predicted Gene
- Lj1g3v4434330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4434330.1 Non Chatacterized Hit- tr|A5BG99|A5BG99_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,55.81,4e-18,seg,NULL; no description,NULL; RNI-like,NULL;
F-BOX/LRR PROTEIN-RELATED, ARATH,NULL; F-BOX/LEUCINE ,CUFF.35686.1
(1482 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BI420609 similar to UniRef100_A7PUB1 Cluster: Chromosom... 1068 0.0
gnl|LJGI|TC68508 similar to UniRef100_A7PUB1 Cluster: Chromosome... 321 7e-87
gnl|LJGI|TC68301 similar to UniRef100_A7PUB1 Cluster: Chromosome... 186 3e-46
>gnl|LJGI|BI420609 similar to UniRef100_A7PUB1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 543
Score = 1068 bits (539), Expect = 0.0
Identities = 542/543 (99%)
Strand = Plus / Plus
Query: 533 ggaatgctattgtagacgtttctaacatttcatggattgataagagatctcgtcaaggga 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaatgctattgtagacgtttctaacatttcatggattgataagagatctcgtcaaggga 60
Query: 593 gagacccatcatccattcttacaagatgctgtttaagccctttaagtggggacggtggtg 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagacccatcatccattcttacaagatgctgtttaagccctttaagtggggacggtggtg 120
Query: 653 ctccgggggctcttttgagaaagttgcacctgtacaatattgagagaatggataatgcat 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctccgggggctcttttgagaaagttgcacctgtacaatattgagagaatggataatgcat 180
Query: 713 cccttggtggggcattgttagcatgcccttctctccttgatctggaaattgttgggctcc 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccttggtggggcattgttagcatgcccttctctccttgatctggaaattgttgggctcc 240
Query: 773 atgttgaactgaggcaaacattaatgtcagtaagtgcaaactgccacttgatcgagcgtt 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgttgaactgaggcaaacattaatgtcagtaagtgcaaactgccacttgatcgagcgtt 300
Query: 833 tgtgttttgagtcttctaaagcaggtagagatgatagcttgaaagcgcaaacgtgttctg 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtgttttgagtcttctaaagcaggtagagatgatagcttgaaagcgcaaacgtgttctg 360
Query: 893 agctggtaaacaattgtcctcatctagcttctttatctcttcgagggtttaagctacatg 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agctggtaaacaattgtcctcatctagcttctttatctcttcgagggtttaagctacatg 420
Query: 953 attgtaaagttcgcatactggttaagggatttcggaaactgaaatatgttgacttttcaa 1012
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attgtaaagctcgcatactggttaagggatttcggaaactgaaatatgttgacttttcaa 480
Query: 1013 catcctattcaatcacgggaaatttcttaagaaaccttggaagctgcaatggtgggaact 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 catcctattcaatcacgggaaatttcttaagaaaccttggaagctgcaatggtgggaact 540
Query: 1073 tgc 1075
|||
Sbjct: 541 tgc 543
>gnl|LJGI|TC68508 similar to UniRef100_A7PUB1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 723
Score = 321 bits (162), Expect = 7e-87
Identities = 321/374 (85%)
Strand = Plus / Plus
Query: 223 aaacgcgcttcccaccataattcactctcctggcccctctctcacgacctcaccatcaag 282
||||| |||||| | ||||||||| || | ||||| ||| ||| |||||||| ||||||
Sbjct: 340 aaacgtgcttccaagcataattcaatcgcttggcctctccctcctgacctcactatcaag 399
Query: 283 gtcttctcgatgcttgatacccagagcctgtgctatgcatcggcttcttgttcattcttt 342
|| ||||| |||||||| ||||||||||||||||| || ||| ||||| |||| |||
Sbjct: 400 gtgttctcagctcttgatactcagagcctgtgctatgcgtctgctacttgtacattgttt 459
Query: 343 agcaagtgtgccaaagatcctatgtgctatgcaaatcttgatttgactacacctgttccc 402
| || ||||| || |||||| ||||||||| |||||||||||||| |||| |||||||
Sbjct: 460 aataaatgtgctaaggatcctttgtgctatgagaatcttgatttgaccacacttgttccc 519
Query: 403 aaggttaacaatgcagtggttgcaacgatgattcagcgagctggaaaggcactgaggtct 462
|||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 520 aaggttaacaattcagtggtttcaacaatgattcagcgagctggaaaggcactgaggtct 579
Query: 463 cttaagcttggtgttgtccctggtgccactacttcacctggatgttgtcaaccattgatt 522
|||||||||||||| |||||||||| ||| |||||||||| ||||||||||||||| ||
Sbjct: 580 cttaagcttggtgtgatccctggtgctactccttcacctgggtgttgtcaaccattggtt 639
Query: 523 tgtgccgttaggaatgctattgtagacgtttctaacatttcatggattgataagagatct 582
||| || | || ||||| ||||||||||| || ||| | ||||||| |||||||||||||
Sbjct: 640 tgtcccatcagaaatgccattgtagacgtatccaacttctcatggactgataagagatct 699
Query: 583 cgtcaagggagaga 596
|| || ||||||||
Sbjct: 700 cgacaggggagaga 713
>gnl|LJGI|TC68301 similar to UniRef100_A7PUB1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 952
Score = 186 bits (94), Expect = 3e-46
Identities = 175/202 (86%)
Strand = Plus / Plus
Query: 1127 ccaggttgttgacagcgattcttgcaggagatttcaaattgcttgtacatctggacatat 1186
|||||||| ||||||| ||||||||||| |||||||||| ||| ||||||| || || |
Sbjct: 15 ccaggttgctgacagcaattcttgcaggcgatttcaaatcgctcctacatcttgatattt 74
Query: 1187 ccaatagggaaggcttagcatctgaggttgactggtatcggaggtgctacaaccctagta 1246
||||| ||||||||||||||||||||| ||| ||||| | |||||||||||| ||||||
Sbjct: 75 ccaatcgggaaggcttagcatctgagggtgattggtaccataggtgctacaactctagta 134
Query: 1247 ctatgcctataaagcaggttttggaagcaaggcctgatatgcatttggtggctgaatatc 1306
|||||| ||||||||||||| |||||||||||||||||| | |||| ||||||||||
Sbjct: 135 tcatgcctgtaaagcaggttttagaagcaaggcctgatatgtgtctggtagctgaatatc 194
Query: 1307 catcagaaggaagttacatgga 1328
| ||||||||||||||||||
Sbjct: 195 ctcaagaaggaagttacatgga 216