Miyakogusa Predicted Gene
- Lj1g3v4432100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4432100.1 tr|Q2LMD6|Q2LMD6_MALDO MYBR5 OS=Malus domestica
PE=2 SV=1,70.13,3e-19,SWI/SNF COMPLEX-RELATED,NULL,CUFF.32339.1
(208 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75890 similar to UniRef100_Q0PJI5 Cluster: MYB transc... 402 e-112
gnl|LJGI|DC596665 homologue to UniRef100_Q0PJE7 Cluster: MYB tra... 84 4e-16
gnl|LJGI|TC69560 similar to UniRef100_Q0PJB8 Cluster: MYB transc... 78 2e-14
gnl|LJGI|FS352478 homologue to UniRef100_Q0PJJ0 Cluster: MYB tra... 56 9e-08
>gnl|LJGI|TC75890 similar to UniRef100_Q0PJI5 Cluster: MYB transcription factor
MYB136; n=1; Glycine max|Rep: MYB transcription factor
MYB136 - Glycine max (Soybean), partial (94%)
Length = 1501
Score = 402 bits (203), Expect = e-112
Identities = 203/203 (100%)
Strand = Plus / Plus
Query: 1 atggtatccaaaaacccgaatccgccggaagggttctgtttggacccgagcaccatggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atggtatccaaaaacccgaatccgccggaagggttctgtttggacccgagcaccatggct 209
Query: 61 ttaccgggtctcagccccttcgcctccgtctcttccgccgcggaggacgccgccaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttaccgggtctcagccccttcgcctccgtctcttccgccgcggaggacgccgccaagaag 269
Query: 121 atccggaagccctacactattaccaagtctagggagaactggacagaacccgagcacgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atccggaagccctacactattaccaagtctagggagaactggacagaacccgagcacgac 329
Query: 181 aagttcctcgaagctcttcaact 203
|||||||||||||||||||||||
Sbjct: 330 aagttcctcgaagctcttcaact 352
>gnl|LJGI|DC596665 homologue to UniRef100_Q0PJE7 Cluster: MYB transcription factor
MYB135; n=1; Glycine max|Rep: MYB transcription factor
MYB135 - Glycine max (Soybean), partial (58%)
Length = 568
Score = 83.8 bits (42), Expect = 4e-16
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 102 ggaggacgccgccaagaagatccggaagccctacactattaccaagtctagggagaactg 161
||||||| | |||||||||| || || || ||||| || ||||||||||| ||||||||
Sbjct: 201 ggaggaccctgccaagaagacacgcaaaccatacaccatcaccaagtctagagagaactg 260
Query: 162 gacagaacccgagcacgacaagttcctcgaagctcttcaact 203
||| ||||| ||||| || |||||||| ||||||||||||||
Sbjct: 261 gaccgaacctgagcatgataagttccttgaagctcttcaact 302
>gnl|LJGI|TC69560 similar to UniRef100_Q0PJB8 Cluster: MYB transcription factor
MYB146; n=1; Glycine max|Rep: MYB transcription factor
MYB146 - Glycine max (Soybean), partial (91%)
Length = 698
Score = 77.8 bits (39), Expect = 2e-14
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 115 aagaagatccggaagccctacactattaccaagtctagggagaactggacagaacccgag 174
||||||||||||||||| || || ||||||||||| ||||||| |||||| || | |||
Sbjct: 216 aagaagatccggaagccatatacgattaccaagtccagggagagctggaccgagcaggag 275
Query: 175 cacgacaagttcctcgaagctcttcaa 201
||||| ||||| || ||||||||||||
Sbjct: 276 cacgataagtttctagaagctcttcaa 302
>gnl|LJGI|FS352478 homologue to UniRef100_Q0PJJ0 Cluster: MYB transcription factor
MYB118; n=1; Glycine max|Rep: MYB transcription factor
MYB118 - Glycine max (Soybean), partial (38%)
Length = 665
Score = 56.0 bits (28), Expect = 9e-08
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 114 caagaagatccggaagccctacactattaccaagtctagggagaactggacagaacccga 173
|||||||||| | ||||| ||||| ||||||||||| ||||| | |||||| || ||
Sbjct: 463 caagaagatcagaaagccttacaccattaccaagtccagggaaagctggactgatgaaga 404
Query: 174 gcacgacaagttcctcgaagctcttcaactgt 205
|| |||||||| || ||||||||||||||||
Sbjct: 403 acatgacaagtttcttgaagctcttcaactgt 372