Miyakogusa Predicted Gene

Lj1g3v4431080.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4431080.1 Non Chatacterized Hit- tr|I1JNT8|I1JNT8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,84.09,0,PROTEIN
TRANSLOCASE SECY SUBUNIT,NULL; SECY/SEC61-ALPHA FAMILY
MEMBER,SecY/SEC61-alpha family; SECYT,CUFF.32337.1
         (1692 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW618823 similar to UniRef100_A7PU98 Cluster: Chromosom...   670   0.0  

>gnl|LJGI|BW618823 similar to UniRef100_A7PU98 Cluster: Chromosome chr7 scaffold_31,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_31, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 478

 Score =  670 bits (338), Expect = 0.0
 Identities = 338/338 (100%)
 Strand = Plus / Plus

                                                                       
Query: 101 gaatcaccttccaccgaatcggaacacctagggtttcccttctcaacaatttcccttccc 160
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gaatcaccttccaccgaatcggaacacctagggtttcccttctcaacaatttcccttccc 200

                                                                       
Query: 161 tcaaccgctctttgtctcaccggaggactctctccgtcaacttcttcgaccggctccgga 220
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaccgctctttgtctcaccggaggactctctccgtcaacttcttcgaccggctccgga 260

                                                                       
Query: 221 gcgactctgttgaagccgaatctccgaatgaggaagttgttctgctgccgagtcgcggcg 280
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgactctgttgaagccgaatctccgaatgaggaagttgttctgctgccgagtcgcggcg 320

                                                                       
Query: 281 gcgacggaggggaagcggttgtgccgacgggagatcttcagttgaaacctagaatgttta 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcgacggaggggaagcggttgtgccgacgggagatcttcagttgaaacctagaatgttta 380

                                                                       
Query: 341 gaaataggtttctgaacttcgtgcggttcgggtctgtgattaacggtgctgctgagtcgt 400
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaataggtttctgaacttcgtgcggttcgggtctgtgattaacggtgctgctgagtcgt 440

                                                 
Query: 401 ttttcaagagcgagattcggaggaggctgtttgtgact 438
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttcaagagcgagattcggaggaggctgtttgtgact 478



 Score = 75.8 bits (38), Expect = 8e-13
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                
Query: 1  atggaagcagcaacgcgattctctccgaatcacttcct 38
          ||||||||||||||||||||||||||||||||||||||
Sbjct: 41 atggaagcagcaacgcgattctctccgaatcacttcct 78