Miyakogusa Predicted Gene
- Lj1g3v4419940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4419940.1 tr|A9TAZ3|A9TAZ3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_142792,44.29,3e-19,seg,NULL; UNCHARACTERIZED,NULL;
ANCIENT CONSERVED DOMAIN
PROTEIN-RELATED,NULL,NODE_35927_length_843_cov_30.507711.path2.1
(492 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB829509 homologue to UniRef100_A7PU79 Cluster: Chromos... 359 1e-98
gnl|LJGI|TC77033 similar to UniRef100_A7PU79 Cluster: Chromosome... 165 3e-40
gnl|LJGI|TC75738 homologue to UniRef100_A7NWF1 Cluster: Chromoso... 66 2e-10
>gnl|LJGI|CB829509 homologue to UniRef100_A7PU79 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 531
Score = 359 bits (181), Expect = 1e-98
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 1 atgcctttatatgatatactcaatgagtttcaaaaaggaagcagccatatggcagctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgcctttatatgatatactcaatgagtttcaaaaaggaagcagccatatggcagctgta 410
Query: 61 gttaaggttgcaagagagagtaagaaccctcaggaagcttgttacatgggaaaatccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gttaaggttgcaagagagagtaagaaccctcaggaagcttgttacatgggaaaatccaag 470
Query: 121 aatgaaaaattcaccaaacatagttctaagctaactgtgccgttactagccaggtcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aatgaaaaattcaccaaacatagttctaagctaactgtgccgttactagccaggtcttct 530
Query: 181 g 181
|
Sbjct: 531 g 531
>gnl|LJGI|TC77033 similar to UniRef100_A7PU79 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 505
Score = 165 bits (83), Expect = 3e-40
Identities = 95/99 (95%)
Strand = Plus / Plus
Query: 393 tgtacatagaagaatacgggttgcagctgtggcagctgcttcatttgtggcacgagttcc 452
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtacatagaagaatacggtttgcagctgtggcagctgcttcatttgtggcacgagttcc 60
Query: 453 attggtccaaaagttgaatcacaactcacaagcttgagg 491
|||||||| ||||||||||||| |||||| |||||||||
Sbjct: 61 attggtccgaaagttgaatcacgactcactagcttgagg 99
>gnl|LJGI|TC75738 homologue to UniRef100_A7NWF1 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 1641
Score = 65.9 bits (33), Expect = 2e-10
Identities = 120/149 (80%)
Strand = Plus / Plus
Query: 298 gaagatggggaagttattggcatcataaccttggaggacgtttttgaagaactcttgcag 357
|||||||| ||||| ||||| || || |||||||| || || ||||||||||| ||||
Sbjct: 649 gaagatggtgaagtgattggtattatcaccttggaagatgtatttgaagaacttctgcaa 708
Query: 358 gaagaaatagtagatgaaacagatgagtatatagatgtacatagaagaatacgggttgca 417
|| || || || ||||| |||||||| ||| | ||||| |||| |||||||| || ||
Sbjct: 709 gaggagattgtggatgagacagatgaatatgttgatgttcataagagaatacgtgtggct 768
Query: 418 gctgtggcagctgcttcatttgtggcacg 446
|||| ||||||||||| | |||||||||
Sbjct: 769 gctgctgcagctgcttcctctgtggcacg 797