Miyakogusa Predicted Gene
- Lj1g3v4407610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4407610.1 tr|B7FL19|B7FL19_MEDTR Exosome complex
exonuclease RRP4 OS=Medicago truncatula GN=MTR_4g121550 PE=2
,86.54,0,coiled-coil,NULL; RRP4,NULL; PNAS-3 RELATED,Exosome complex
RNA-binding protein 1/RRP40/RRP4; seg,NU,CUFF.32320.1
(984 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65176 similar to UniRef100_A7PU41 Cluster: Chromosome... 1951 0.0
>gnl|LJGI|TC65176 similar to UniRef100_A7PU41 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (93%)
Length = 1427
Score = 1951 bits (984), Expect = 0.0
Identities = 984/984 (100%)
Strand = Plus / Plus
Query: 1 atgagagggatacagttaacattgagccaaactcagaaaattcgtcttcaaaaggctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 atgagagggatacagttaacattgagccaaactcagaaaattcgtcttcaaaaggctctg 225
Query: 61 gagcagctggagtctctgtcatcgaaggtgaattctgatgcttctgtgaccattgctgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gagcagctggagtctctgtcatcgaaggtgaattctgatgcttctgtgaccattgctgac 285
Query: 121 tctatccctgtgaaccatgaagatggcgtccttaagggacatggaactggcgacctcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tctatccctgtgaaccatgaagatggcgtccttaagggacatggaactggcgacctcaat 345
Query: 181 ggtgaagtcgttgccacagtctgcggtgttgttgagcgtgttaacaagcttgtctatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggtgaagtcgttgccacagtctgcggtgttgttgagcgtgttaacaagcttgtctatgtc 405
Query: 241 cgctccttgcgctctaggtacaaacctgaggttggtgacatcattatagggcgtgttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cgctccttgcgctctaggtacaaacctgaggttggtgacatcattatagggcgtgttatt 465
Query: 301 gaggttgctcagaagcgttggagattggagataaattacagtcaagatgcatttttgatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaggttgctcagaagcgttggagattggagataaattacagtcaagatgcatttttgatg 525
Query: 361 ctttcttctatgaatatgcctgatggtgtccagaggcggaggacatctgtagatgagcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ctttcttctatgaatatgcctgatggtgtccagaggcggaggacatctgtagatgagcta 585
Query: 421 aatatgcgctgtattttcgaggagaaggatgttgtttgtgccgaagttcgtggttttcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aatatgcgctgtattttcgaggagaaggatgttgtttgtgccgaagttcgtggttttcag 645
Query: 481 catgatggcttacatcttcaagcaagaagtaaaaaatatggaaagcttaatagcggtcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 catgatggcttacatcttcaagcaagaagtaaaaaatatggaaagcttaatagcggtcaa 705
Query: 541 ctgcttacagtcccaccatatttagtgaagagacaaaagctacatttccatcatctagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ctgcttacagtcccaccatatttagtgaagagacaaaagctacatttccatcatctagag 765
Query: 601 cagtatggtgttgatttgatacttggttgtaatggattcatatgggtgggggaacatgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 cagtatggtgttgatttgatacttggttgtaatggattcatatgggtgggggaacatgtt 825
Query: 661 gaagctagagatgagatggtagaagatcaagtgaaccagtctgatccccaagttccatcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gaagctagagatgagatggtagaagatcaagtgaaccagtctgatccccaagttccatcc 885
Query: 721 cccaacaaaaattccagggatcttgaagaacaagagaaaaactatacagcattggagaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 cccaacaaaaattccagggatcttgaagaacaagagaaaaactatacagcattggagaca 945
Query: 781 agaaaatatatatgccgggctgctaatgctgttagagtattgtcgaccttgggcttcgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 agaaaatatatatgccgggctgctaatgctgttagagtattgtcgaccttgggcttcgtt 1005
Query: 841 attactgtcgaaatcatcaaaggaattattgatctaagcctttctctaaatcttgatata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 attactgtcgaaatcatcaaaggaattattgatctaagcctttctctaaatcttgatata 1065
Query: 901 cacgacatgcttggttctgagtttggtgttttggtggctgaaagagaggtcgaaaggaga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 cacgacatgcttggttctgagtttggtgttttggtggctgaaagagaggtcgaaaggaga 1125
Query: 961 agctccagtaaaaggaaacggtag 984
||||||||||||||||||||||||
Sbjct: 1126 agctccagtaaaaggaaacggtag 1149