Miyakogusa Predicted Gene
- Lj1g3v4404380.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4404380.1 Non Chatacterized Hit- tr|I1JNP9|I1JNP9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28082 PE,79.07,0,WD40
repeats,WD40 repeat; no description,WD40/YVTN repeat-like-containing
domain; BREAST CARCINOMA A,CUFF.32329.1
(2952 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75261 similar to UniRef100_A7PU26 Cluster: Chromosome... 839 0.0
gnl|LJGI|BP051696 homologue to UniRef100_A7PU26 Cluster: Chromos... 446 e-124
gnl|LJGI|TC73027 similar to UniRef100_A7PU26 Cluster: Chromosome... 359 6e-98
gnl|LJGI|TC70850 349 6e-95
gnl|LJGI|TC72569 107 4e-22
>gnl|LJGI|TC75261 similar to UniRef100_A7PU26 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 427
Score = 839 bits (423), Expect = 0.0
Identities = 426/427 (99%)
Strand = Plus / Plus
Query: 2091 tttcagagggctgcctatatggcaaaagtccaagattggtttctatacaatgagttgtgt 2150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttcagagggctgcctatatggcaaaagtccaagattggtttctatacaatgagttgtgt 60
Query: 2151 aagaactagttttaatgctggtggagagtctgaaattgaaaaagtgtctgctaaagaagt 2210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagaactagttttaatgctggtggagagtctgaaattgaaaaagtgtctgctaaagaagt 120
Query: 2211 tgaaataagacggaaggagctgctgcctgtttttgaccattttcacagcatcagaccaag 2270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaataagacggaaggagctgctgcctgtttttgaccattttcacagcatcagaccaag 180
Query: 2271 ctggaacgagagaagccttgctggggaaagatatttaagcccgacgcctcctgttcccaa 2330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctggaacgagagaagccttgctggggaaagatatttaagcccgacgcctcctgttcccaa 240
Query: 2331 tcatgctgaagacaaggaaacggctgatgtgacggttatttgtcattcaaatccagcttc 2390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcatgctgaagacaaggaaacggctgatgtgacggttatttgtcattcaaatccagcttc 300
Query: 2391 attgagttccactgaaagttcagaaggaggttcatcaagaagaattgaaaatctgcttga 2450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attgagttccactgaaagttcagaaggaggttcatcaagaagaattgaaaatctgcttga 360
Query: 2451 cctggatcaagttgcttccagttaccaaatgcttggtgaaatatacaaagaaagaatggg 2510
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 361 cctggatcaagttgcttccagttaccaaatgcttggtgaaatataccaagaaagaatggg 420
Query: 2511 ggcaatc 2517
|||||||
Sbjct: 421 ggcaatc 427
>gnl|LJGI|BP051696 homologue to UniRef100_A7PU26 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 506
Score = 446 bits (225), Expect = e-124
Identities = 230/232 (99%)
Strand = Plus / Plus
Query: 2281 agaagccttgctggggaaagatatttaagcccgacgcctcctgttcccaatcatgctgaa 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 agaagccttgctggggaaagatatttaagcccgacgcctcctgttcccaatcatgctgaa 334
Query: 2341 gacaaggaaacggctgatgtgacggttatttgtcattcaaatccagcttcattgagttcc 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gacaaggaaacggctgatgtgacggttatttgtcattcaaatccagcttcattgagttcc 394
Query: 2401 actgaaagttcagaaggaggttcatcaagaagaattgaaaatctgcttgacctggatcaa 2460
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 395 actgaaagttcagaaggaggttcatcaagaagaattgaaaatctgcttgacctgnatcaa 454
Query: 2461 gttgcttccagttaccaaatgcttggtgaaatatacaaagaaagaatggggg 2512
|||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 455 gttgcttccagttaccaaatgcttggtgaaatataccaagaaagaatggggg 506
>gnl|LJGI|TC73027 similar to UniRef100_A7PU26 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 510
Score = 359 bits (181), Expect = 6e-98
Identities = 187/189 (98%)
Strand = Plus / Plus
Query: 1 atgaagaaagggaaggggaagaacaacggcttgctgccgaattccttgaggatcatctct 60
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atgaaaaaagggaaggggaaaaacaacggcttgctgccgaattccttgaggatcatctct 381
Query: 61 ctttgcctcaaaactgtctccaccaacgccaccaccgttgcttccaccgtacgctccgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctttgcctcaaaactgtctccaccaacgccaccaccgttgcttccaccgtacgctccgcc 441
Query: 121 ggcgcctccgttgccgcttcaatttcctctacttccgaggatcacaaagaccaggtaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggcgcctccgttgccgcttcaatttcctctacttccgaggatcacaaagaccaggtaacc 501
Query: 181 tgggctggt 189
|||||||||
Sbjct: 502 tgggctggt 510
>gnl|LJGI|TC70850
Length = 603
Score = 349 bits (176), Expect = 6e-95
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 2777 ctttccagggtggccactgcaagacactggagcatgatggaagtaatgtgttaactgaag 2836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctttccagggtggccactgcaagacactggagcatgatggaagtaatgtgttaactgaag 60
Query: 2837 ttgttgctgatgatgttaacagcagtagtagcctccgtgagaatgcgcaattggaggagg 2896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgttgctgatgatgttaacagcagtagtagcctccgtgagaatgcgcaattggaggagg 120
Query: 2897 atggggaggatgatgaaatgcttggtggcatatttgccttttcggaagaaggttga 2952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggggaggatgatgaaatgcttggtggcatatttgccttttcggaagaaggttga 176
>gnl|LJGI|TC72569
Length = 523
Score = 107 bits (54), Expect = 4e-22
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 2899 ggggaggatgatgaaatgcttggtggcatatttgccttttcggaagaaggttga 2952
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggggaggatgatgaaatgcttggtggcatatttgccttttcggaagaaggttga 54