Miyakogusa Predicted Gene

Lj1g3v4327770.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4327770.1 CUFF.32268.1
         (328 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW613680 similar to UniRef100_Q14517 Cluster: Cadherin-...   371   e-102
gnl|LJGI|TC66048 similar to UniRef100_A7Q1G5 Cluster: Chromosome...    74   6e-13
gnl|LJGI|TC60903 similar to UniRef100_A7Q1G5 Cluster: Chromosome...    74   6e-13
gnl|LJGI|TC57463 similar to UniRef100_A7Q1G5 Cluster: Chromosome...    74   6e-13
gnl|LJGI|TC77209 similar to UniRef100_A7Q1G5 Cluster: Chromosome...    66   1e-10
gnl|LJGI|TC68982                                                       62   2e-09

>gnl|LJGI|BW613680 similar to UniRef100_Q14517 Cluster: Cadherin-related tumor
           suppressor homolog precursor; n=2; Homo sapiens|Rep:,
           partial (0%)
          Length = 489

 Score =  371 bits (187), Expect = e-102
 Identities = 187/187 (100%)
 Strand = Plus / Minus

                                                                       
Query: 142 actgggtttgtgtctattcttctgggttttgctgggtctctaactgcagttcatccagcc 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 actgggtttgtgtctattcttctgggttttgctgggtctctaactgcagttcatccagcc 430

                                                                       
Query: 202 actgcgttgtacagccacaaccccaacgcaccgcacatccgccagcggttgtacagcaac 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 actgcgttgtacagccacaaccccaacgcaccgcacatccgccagcggttgtacagcaac 370

                                                                       
Query: 262 accagcggcgttctcagcacaatcggtactccgaccactgtagaaccatggagatggctt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 accagcggcgttctcagcacaatcggtactccgaccactgtagaaccatggagatggctt 310

                  
Query: 322 acctgat 328
           |||||||
Sbjct: 309 acctgat 303


>gnl|LJGI|TC66048 similar to UniRef100_A7Q1G5 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (75%)
          Length = 767

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 86  gtcacaaagctcttcactttctccatccccatttcca 122
           |||||||||||||||||||||||||||||||||||||
Sbjct: 151 gtcacaaagctcttcactttctccatccccatttcca 187


>gnl|LJGI|TC60903 similar to UniRef100_A7Q1G5 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (91%)
          Length = 866

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 86  gtcacaaagctcttcactttctccatccccatttcca 122
           |||||||||||||||||||||||||||||||||||||
Sbjct: 133 gtcacaaagctcttcactttctccatccccatttcca 169


>gnl|LJGI|TC57463 similar to UniRef100_A7Q1G5 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (92%)
          Length = 929

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 86  gtcacaaagctcttcactttctccatccccatttcca 122
           |||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtcacaaagctcttcactttctccatccccatttcca 237


>gnl|LJGI|TC77209 similar to UniRef100_A7Q1G5 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 732

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 86  gtcacaaagctcttcactttctccatccccatttcca 122
           ||||||||| |||||||||||||||||||||||||||
Sbjct: 44  gtcacaaagttcttcactttctccatccccatttcca 80


>gnl|LJGI|TC68982 
          Length = 750

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 91  aaagctcttcactttctccatccccatttccaattaaccagat 133
           ||||||||||| ||| ||||||||||||||||| |||||||||
Sbjct: 415 aaagctcttcagtttttccatccccatttccaaataaccagat 457