Miyakogusa Predicted Gene
- Lj1g3v4317680.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4317680.2 tr|G7KVD6|G7KVD6_MEDTR DNA polymerase delta small
subunit OS=Medicago truncatula GN=MTR_7g093210
PE=,86.54,0,DNA_pol_E_B,DNA polymerase alpha/epsilon, subunit B; DNA
POLYMERASE DELTA SUBUNIT 2,NULL; DNA POLYME,CUFF.32264.2
(1311 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76412 similar to UniRef100_A7PVW5 Cluster: Chromosome... 1881 0.0
gnl|LJGI|TC79080 similar to UniRef100_A7PVW5 Cluster: Chromosome... 192 4e-48
>gnl|LJGI|TC76412 similar to UniRef100_A7PVW5 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 1002
Score = 1881 bits (949), Expect = 0.0
Identities = 949/949 (100%)
Strand = Plus / Plus
Query: 1 atggtgatggacagagtgcaatgctcctacgagcccttggatgaaccattcgagattggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atggtgatggacagagtgcaatgctcctacgagcccttggatgaaccattcgagattggg 113
Query: 61 aaagagatgtatcgaggacaacaatacagccaaatctacttcgctcgccttcacctgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 aaagagatgtatcgaggacaacaatacagccaaatctacttcgctcgccttcacctgatg 173
Query: 121 cgaacactcttgcactctcttgtcccgcatttgaaacccaatcttcctgtatgcacagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 cgaacactcttgcactctcttgtcccgcatttgaaacccaatcttcctgtatgcacagtt 233
Query: 181 ttgggattggaagaacaagcgggcaaggagtgtgtcattgttggaactctctataagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ttgggattggaagaacaagcgggcaaggagtgtgtcattgttggaactctctataagcat 293
Query: 241 atgaagctcaaaccttgcatacttgatgagtattctaaggagagatcggctgttccactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 atgaagctcaaaccttgcatacttgatgagtattctaaggagagatcggctgttccactt 353
Query: 301 gtcaagccacataacttcatgcacccagatgaccacctaattttggaagatgaaagcggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gtcaagccacataacttcatgcacccagatgaccacctaattttggaagatgaaagcggg 413
Query: 361 agagttaagcttggtggggatctcatttcaccttccgtatacgtaacaggaattgtggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 agagttaagcttggtggggatctcatttcaccttccgtatacgtaacaggaattgtggtt 473
Query: 421 gctgtacatggaaaggaaacagaggctggtgaatttttggttcaggatgttctagaagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gctgtacatggaaaggaaacagaggctggtgaatttttggttcaggatgttctagaagct 533
Query: 481 ggcttaccaccacaaatagaatttccacttaaatcaagggaagacaaatacgttgttttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ggcttaccaccacaaatagaatttccacttaaatcaagggaagacaaatacgttgttttt 593
Query: 541 gtgtcaggattaagtattgggagcagcaactctaatcctcttcagtttcagcttctcatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gtgtcaggattaagtattgggagcagcaactctaatcctcttcagtttcagcttctcatt 653
Query: 601 gatcatattactgggcatttaggagatgagaaggaaaaaagtattgcgtcacaaactgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gatcatattactgggcatttaggagatgagaaggaaaaaagtattgcgtcacaaactgtt 713
Query: 661 cgcgtggtcattgctggaaattctgttgagatacctagtggactttttaatggacagaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 cgcgtggtcattgctggaaattctgttgagatacctagtggactttttaatggacagaat 773
Query: 721 atgggttcaaaggatctgtcaaggatatctgaaccaataaaggagctagatattctgttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 atgggttcaaaggatctgtcaaggatatctgaaccaataaaggagctagatattctgttg 833
Query: 781 aatcagattgctgctggtttgcctttggacataatgccagggcccagtgacccttcaaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 aatcagattgctgctggtttgcctttggacataatgccagggcccagtgacccttcaaat 893
Query: 841 tactcattaccacagcaggcgctgcatagatgccttttccctgggtcgtcagcatataac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 tactcattaccacagcaggcgctgcatagatgccttttccctgggtcgtcagcatataac 953
Query: 901 acttttacatcttgtacaaatcctcatagttttgagcttgataatatca 949
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 acttttacatcttgtacaaatcctcatagttttgagcttgataatatca 1002
>gnl|LJGI|TC79080 similar to UniRef100_A7PVW5 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 403
Score = 192 bits (97), Expect = 4e-48
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1215 tcctaaattcagtgaaactggagttgctgttatgttaaatctgagggatctggaatgtca 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctaaattcagtgaaactggagttgctgttatgttaaatctgagggatctggaatgtca 60
Query: 1275 tgctctcagttttggaacccagttcagctcataatgc 1311
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctctcagttttggaacccagttcagctcataatgc 97