Miyakogusa Predicted Gene

Lj1g3v4317470.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4317470.1 Non Chatacterized Hit- tr|D7FN41|D7FN41_ECTSI
Uncharacterized protein OS=Ectocarpus siliculosus
GN=U,47.67,7e-16,RRM_1,RNA recognition motif domain; RNA-binding
domain, RBD,NULL; RNA recognition motif,RNA recognit,CUFF.32238.1
         (1014 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP036103 similar to UniRef100_Q6IEI7 Cluster: RTN6; n=1...   295   3e-79

>gnl|LJGI|BP036103 similar to UniRef100_Q6IEI7 Cluster: RTN6; n=1; Cyprinus carpio|Rep:
            RTN6 - Cyprinus carpio (Common carp), partial (10%)
          Length = 423

 Score =  295 bits (149), Expect = 3e-79
 Identities = 149/149 (100%)
 Strand = Plus / Minus

                                                                        
Query: 866  tacctccccttactgcaccaccctctgcttacccagcacaagggcaggttccttatgctc 925
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423  tacctccccttactgcaccaccctctgcttacccagcacaagggcaggttccttatgctc 364

                                                                        
Query: 926  cagtttctgccaagaaagaccaactcggggtccctccaactcaacctgtgggaatgaaca 985
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363  cagtttctgccaagaaagaccaactcggggtccctccaactcaacctgtgggaatgaaca 304

                                         
Query: 986  agtacccttattactatcccaagcaataa 1014
            |||||||||||||||||||||||||||||
Sbjct: 303  agtacccttattactatcccaagcaataa 275