Miyakogusa Predicted Gene

Lj1g3v4316400.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4316400.1 tr|G7KVB0|G7KVB0_MEDTR Protein
STRUBBELIG-RECEPTOR FAMILY OS=Medicago truncatula GN=MTR_7g092910
PE=,68.77,0,no description,NULL; seg,NULL; PROTEIN_KINASE_DOM,Protein
kinase, catalytic domain; SUBFAMILY NOT NA,CUFF.32234.1
         (2031 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77624 similar to UniRef100_Q0PKR6 Cluster: RhoGAP1; n...   101   2e-20
gnl|LJGI|TC65649 similar to UniRef100_A7P793 Cluster: Chromosome...    66   9e-10

>gnl|LJGI|TC77624 similar to UniRef100_Q0PKR6 Cluster: RhoGAP1; n=1; Nicotiana
           tabacum|Rep: RhoGAP1 - Nicotiana tabacum (Common
           tobacco), partial (16%)
          Length = 926

 Score =  101 bits (51), Expect = 2e-20
 Identities = 102/119 (85%)
 Strand = Plus / Plus

                                                                       
Query: 100 gctctccaagatctatacagggccttaaactacccgcccgcgctccaaggatggaatggc 159
           |||||||| || ||||||||  |||| |||||||| || | ||| |||||||||||||| 
Sbjct: 84  gctctccaggacctatacagaaccttgaactacccaccggagcttcaaggatggaatggt 143

                                                                      
Query: 160 agcgatccttgtggggagtcttggaaaggagtggcttgttcagagtcatcagtaataca 218
           ||||||||||||| |||||||||||| ||||| || ||||| | ||||||||| |||||
Sbjct: 144 agcgatccttgtgtggagtcttggaacggagtagcatgttctgggtcatcagttataca 202


>gnl|LJGI|TC65649 similar to UniRef100_A7P793 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 980

 Score = 65.9 bits (33), Expect = 9e-10
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 100 gctctccaagatctatacagggccttaaactacccgcccgcgctccaaggatggaatggc 159
           |||||||| || ||||||||  |||| |||||||| || | ||| |||||||||||||| 
Sbjct: 390 gctctccaggacctatacagaaccttgaactacccaccagagcttcaaggatggaatggt 331

                        
Query: 160 agcgatccttgtg 172
           |||||||||||||
Sbjct: 330 agcgatccttgtg 318