Miyakogusa Predicted Gene
- Lj1g3v4288730.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4288730.1 Non Chatacterized Hit- tr|I1JNF7|I1JNF7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39622
PE,73.24,0,ZINC_FINGER_C2H2_2,Zinc finger, C2H2; C2H2 and C2HC zinc
fingers,NULL; seg,NULL; coiled-coil,NULL; A,CUFF.32173.1
(1029 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80672 homologue to UniRef100_A7PWB2 Cluster: Chromoso... 702 0.0
gnl|LJGI|TC76316 homologue to UniRef100_A7PWB2 Cluster: Chromoso... 385 e-106
gnl|LJGI|BP051546 homologue to UniRef100_A7PWB2 Cluster: Chromos... 280 2e-74
gnl|LJGI|FS360083 homologue to UniRef100_A7QFD3 Cluster: Chromos... 80 3e-14
>gnl|LJGI|TC80672 homologue to UniRef100_A7PWB2 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 572
Score = 702 bits (354), Expect = 0.0
Identities = 354/354 (100%)
Strand = Plus / Plus
Query: 198 aagagtggagctccccctcttgggcctaagtccagcaaagcaagaagaatataatgaaga 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aagagtggagctccccctcttgggcctaagtccagcaaagcaagaagaatataatgaaga 278
Query: 258 gcaagaacaacaagaagatcacctttccaaagaggaggagctggaagaagaagatcaaga 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gcaagaacaacaagaagatcacctttccaaagaggaggagctggaagaagaagatcaaga 338
Query: 318 agatggaactgtcactgttgcactccacataggtttaccaagccctagtgctgctgaaat 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 agatggaactgtcactgttgcactccacataggtttaccaagccctagtgctgctgaaat 398
Query: 378 tgcctctgtgatgtcctcaaattcttcagagatctctgataatcataaagatcatgttat 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tgcctctgtgatgtcctcaaattcttcagagatctctgataatcataaagatcatgttat 458
Query: 438 ggatggtgaggatgattctgggctcatgagtaccaacaggctcaacaagggccagtactg 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ggatggtgaggatgattctgggctcatgagtaccaacaggctcaacaagggccagtactg 518
Query: 498 gatccctactccttctcagattctcattggtcctacccagttttcttgccctgt 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gatccctactccttctcagattctcattggtcctacccagttttcttgccctgt 572
Score = 85.7 bits (43), Expect = 5e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 atggctgatccctactccaatttcttctcatcacctggtttct 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atggctgatccctactccaatttcttctcatcacctggtttct 64
>gnl|LJGI|TC76316 homologue to UniRef100_A7PWB2 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 588
Score = 385 bits (194), Expect = e-106
Identities = 194/194 (100%)
Strand = Plus / Plus
Query: 836 ggagaacccatgagaagaattgtgggaagctttggtattgcatctgtgggtctgatttca 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagaacccatgagaagaattgtgggaagctttggtattgcatctgtgggtctgatttca 60
Query: 896 agcacaagaggtctctaaaggatcacatcaaagcttttggaagtggccatgcagcttatg 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcacaagaggtctctaaaggatcacatcaaagcttttggaagtggccatgcagcttatg 120
Query: 956 ggattgatggctttgaagaagaggatgagccagcttctgaagtagagcaagataatgatt 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggattgatggctttgaagaagaggatgagccagcttctgaagtagagcaagataatgatt 180
Query: 1016 ccacccagtaatga 1029
||||||||||||||
Sbjct: 181 ccacccagtaatga 194
>gnl|LJGI|BP051546 homologue to UniRef100_A7PWB2 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 574
Score = 280 bits (141), Expect = 2e-74
Identities = 252/289 (87%)
Strand = Plus / Minus
Query: 649 caaccaacaggaatgctgagacttccatgctactgttgttctccagggtgcaggaacaac 708
|||||||||| |||||| ||||| |||||||| || ||| | ||||| |||| |||||||
Sbjct: 543 caaccaacagcaatgctaagactcccatgctattgctgtgcaccaggatgcaagaacaac 484
Query: 709 attgatcacccaagagcaaagcctcttaaagatttcagaaccctccaaacacattacaag 768
||||| || ||||||||||| || || ||||| |||||||||||||||||||||||||||
Sbjct: 483 attgaccatccaagagcaaaaccactcaaagacttcagaaccctccaaacacattacaag 424
Query: 769 aggaagcatgggatcaaacccttcatgtgcagaaagtgtggcaaggcttttgctgtgagg 828
|| ||||| || |||||||| |||||||||||||| ||| |||| || ||||| |||||
Sbjct: 423 agaaagcacggaatcaaacctttcatgtgcagaaaatgttgcaaagcgtttgcagtgaga 364
Query: 829 ggagattggagaacccatgagaagaattgtgggaagctttggtattgcatctgtgggtct 888
||||||||||| || ||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 363 ggagattggaggactcatgagaagaactgtgggaagctttggtattgctcttgtgggtcc 304
Query: 889 gatttcaagcacaagaggtctctaaaggatcacatcaaagcttttggaa 937
||||||||||||||||| ||||| |||||||| ||||| || |||||||
Sbjct: 303 gatttcaagcacaagagatctcttaaggatcatatcaaggcgtttggaa 255
>gnl|LJGI|FS360083 homologue to UniRef100_A7QFD3 Cluster: Chromosome undetermined
scaffold_87, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_87, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (17%)
Length = 785
Score = 79.8 bits (40), Expect = 3e-14
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 832 gattggagaacccatgagaagaattgtgggaagctttggtattgcatctgtgggtctgat 891
|||||||| || ||||||||||| ||||| ||| | |||||||||| ||||| || |||
Sbjct: 753 gattggaggactcatgagaagaactgtggcaagttgtggtattgcacttgtggctcagat 694
Query: 892 ttcaagcacaagaggtctctaaaggatcacat 923
|||||||||||||| ||||| || ||||||||
Sbjct: 693 ttcaagcacaagagatctctcaaagatcacat 662