Miyakogusa Predicted Gene

Lj1g3v4252320.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4252320.1 Non Chatacterized Hit- tr|I1JND5|I1JND5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.37,0,ARM
repeat,Armadillo-type fold; coiled-coil,NULL;
UNCHARACTERIZED,NULL,CUFF.32135.1
         (3006 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59507 similar to UniRef100_A7PWD9 Cluster: Chromosome...   609   e-173
gnl|LJGI|AV771456 weakly similar to UniRef100_A7Q273 Cluster: Ch...   228   2e-58
gnl|LJGI|TC81387                                                       88   4e-16

>gnl|LJGI|TC59507 similar to UniRef100_A7PWD9 Cluster: Chromosome chr8 scaffold_34,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_34, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 924

 Score =  609 bits (307), Expect = e-173
 Identities = 331/339 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtatggtttccggagtcatttcccggcaagttctgcctgcttgtggcagtctttgt 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 256 atgagtatggtttccggagtcatttcccgtcaagttctgcctgcttgtggcagtctttgt 315

                                                                       
Query: 61  ttcttctgccctgccatgagagccaggtccagacaacctgtcaagaggtacaagaagctc 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ttcttctgccctaccatgagagccaggtccagacaacctgtcaagaggtacaagaagctc 375

                                                                       
Query: 121 attgctgagattttccctcgtaatcaggaggaaggggcgaatgataggaaaataggaaaa 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atcgctgagattttccctcgtaatcaggaggaaggggcgaatgataggaaaataggaaaa 435

                                                                       
Query: 181 ctatgtgattatgctgccaaaaatcctttacgcatcccaaagattgtgaatgccctcgag 240
           ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||
Sbjct: 436 ctatgtgattatgctgccaaaaatcttttacccatcccaaagattgtgaatgcccttgag 495

                                                                       
Query: 241 caaaggtgttacaaggagctacgaagcgagaatttacattcaacaaaaatagtcatgtgt 300
           |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 496 caaaggtgttacaaggagctacgaaatgagaatttacattcaacaaaaatagtcatgtgt 555

                                                  
Query: 301 atttacaagaaatttctgttttcttgtaaagaacaaatg 339
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atttacaagaaatttctgttttcttgtaaagaacaaatg 594



 Score = 69.9 bits (35), Expect = 9e-11
 Identities = 47/50 (94%), Gaps = 2/50 (4%)
 Strand = Plus / Plus

                                                             
Query: 583 gttcggtttatgggcgaacactct--catatatcagttgagtttgataat 630
           |||| |||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 594 gttcagtttatgggcgaacactctctcatatatcagttgagtttgataat 643


>gnl|LJGI|AV771456 weakly similar to UniRef100_A7Q273 Cluster: Chromosome chr13
           scaffold_45, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (6%)
          Length = 513

 Score =  228 bits (115), Expect = 2e-58
 Identities = 167/183 (91%), Gaps = 1/183 (0%)
 Strand = Plus / Minus

                                                                       
Query: 159 gaatgataggaaaataggaaaactatgtgattatgctgccaaaaatcctttacgcatccc 218
           ||||||||||||||||||||||||||||||||||||| ||  | ||| ||||| ||||||
Sbjct: 513 gaatgataggaaaataggaaaactatgtgattatgcttccccacatcttttacccatccc 454

                                                                       
Query: 219 aaagattgtgaatgccctcgagcaaaggtgttacaaggagctacgaagcgagaatttaca 278
           | || ||||||||||||| || | |||||||||||||||||||||||  |||||||||||
Sbjct: 453 acagcttgtgaatgcccttgacctaaggtgttacaaggagctacgaaatgagaatttaca 394

                                                                       
Query: 279 ttcaacaaaaatagtcatgtgtatttacaaga-aatttctgttttcttgtaaagaacaaa 337
           ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 393 ttcaacaaacatagtcatgtgtatttacaagacaacttctgttttcttgtaaagaacaaa 334

              
Query: 338 tgc 340
           |||
Sbjct: 333 tgc 331



 Score = 58.0 bits (29), Expect = 3e-07
 Identities = 38/40 (95%), Gaps = 2/40 (5%)
 Strand = Plus / Minus

                                                   
Query: 593 tgggcgaacactctc--atatatcagttgagtttgataat 630
           |||||||||||||||  |||||||||||||||||||||||
Sbjct: 321 tgggcgaacactctctcatatatcagttgagtttgataat 282


>gnl|LJGI|TC81387 
          Length = 561

 Score = 87.7 bits (44), Expect = 4e-16
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                               
Query: 31  caagttctgcctgcttgtggcagtctttgtttcttctgccctgccatgagag 82
           ||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 510 caagttcagcctgcttgtggcagtctttgtttcttctgccctaccatgagag 561