Miyakogusa Predicted Gene

Lj1g3v4251290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4251290.1 CUFF.32133.1
         (414 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73863 similar to UniRef100_Q08194 Cluster: Cysteine-r...   745   0.0  

>gnl|LJGI|TC73863 similar to UniRef100_Q08194 Cluster: Cysteine-rich extensin-like
           protein-1; n=2; Nicotiana tabacum|Rep: Cysteine-rich
           extensin-like protein-1 - Nicotiana tabacum (Common
           tobacco), partial (12%)
          Length = 598

 Score =  745 bits (376), Expect = 0.0
 Identities = 393/401 (98%)
 Strand = Plus / Minus

                                                                       
Query: 14  tggatttctcatccacccccaaacaaaccctaatcgcgaacttggataagaattcctcgc 73
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tggatttctcatccacccccaaacaaaccctaatcgcgaacttggataagaattcctcgc 518

                                                                       
Query: 74  tggccttcaccatctccctcgcgtgcttccacgtcgcgtcgaaggcgatcaacaccaggc 133
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tggccttcaccatctccctcgcgtgcttccacgtcgcgtcgaaggcgatcaacaccaggc 458

                                                                       
Query: 134 cttcattgttgcagctccgggttagcagctctgaagcgcggaggtcggagatgttgacgg 193
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cttcattgttgcagctccgggttagcagctctgaagcgcggaggtcggagatgttgacgg 398

                                                                       
Query: 194 ccggcgaggatgaggttcccgggaagaggaagatggctnnnnnnnattggtcgaggagag 253
           ||||||||||||||||||||||||||||||||||||||       |||||||||||||||
Sbjct: 397 ccggcgaggatgaggttcccgggaagaggaagatggctgggggggattggtcgaggagag 338

                                                                       
Query: 254 gggagaggccgctgcggaggcggcggccggtgatggcggtggcgtggaggagggatttgg 313
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gggagaggccgcggcggaggcggcggccggtgatggcggtggcgtggaggagggatttgg 278

                                                                       
Query: 314 tgaggagtggagtggtggagagcttgtgctgcgcttcgtgggggtggtggaggatgagga 373
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tgaggagtggagtggtggagagcttgtgctgcgcttcgtgggggtggtggaggatgagga 218

                                                    
Query: 374 ctcgggtggtggtttggatgggttgcgcggggagggcgtga 414
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ctcgggtggtggtttggatgggttgcgcggggagggcgtga 177