Miyakogusa Predicted Gene
- Lj1g3v4241090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4241090.1 tr|G7KTH8|G7KTH8_MEDTR AP2-like
ethylene-responsive transcription factor OS=Medicago truncatula
GN=M,88.01,0,seg,NULL; ETHRSPELEMNT,AP2/ERF domain; DNA-binding domain
in plant proteins such as,AP2/ERF domain; ,CUFF.32115.1
(1254 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71440 homologue to UniRef100_Q8GWK2-2 Cluster: Isofor... 1725 0.0
gnl|LJGI|FS342341 homologue to UniRef100_Q6PQQ3 Cluster: AP2-lik... 82 1e-14
gnl|LJGI|TC58976 homologue to UniRef100_A9JQY7 Cluster: AP2 prot... 82 1e-14
gnl|LJGI|DC595978 similar to UniRef100_A7PMN8 Cluster: Chromosom... 58 1e-07
gnl|LJGI|TC75721 similar to UniRef100_Q94AN4 Cluster: AP2-like e... 56 5e-07
>gnl|LJGI|TC71440 homologue to UniRef100_Q8GWK2-2 Cluster: Isoform 2 of Q8GWK2 ; n=1;
Arabidopsis thaliana|Rep: Isoform 2 of Q8GWK2 -
Arabidopsis thaliana (Mouse-ear cress), partial (43%)
Length = 981
Score = 1725 bits (870), Expect = 0.0
Identities = 906/918 (98%)
Strand = Plus / Plus
Query: 1 atggcttcatcttcttccgatccaggcaagtcggcggagacttcagaagccgtcgcggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atggcttcatcttcttccgatccaggcaagtcggcggagacttcagaagccgtcgcggcg 123
Query: 61 gcgaacgaccagttattactctacagaggattgaagaaagcgaagaaggaaagaggttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gcgaacgaccagttattactctacagaggattgaagaaagcgaagaaggaaagaggttgc 183
Query: 121 accgccaaagagagaatcagtaaaatgcctccttgtgccgccggtaaacgcagctccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 accgccaaagagagaatcagtaaaatgcctccttgtgccgccggtaaacgcagctccatc 243
Query: 181 taccgcggtgtcaccaggcatagatggactggtcgctatgaagcgcatctttgggataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 taccgcggtgtcaccaggcatagatggactggtcgctatgaagcgcatctttgggataaa 303
Query: 241 agtacatggaaccagaatcagaataagaaaggaaagcaagtttacttgggggcgtatgat 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 304 agtacatggaaccagaatcagaataagaagggaaagcaagtttacttgggggcgtatgat 363
Query: 301 gatgaggaagcggcggctagagcgtatgatcttgctgctctgaaatattggggtcctggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gatgaggaagcggcggctagagcgtatgatcttgctgctctgaaatattggggtcctggg 423
Query: 361 actctcattaacttcccagtgactgattatacaagagatcttgaagaaatgcagaatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 actctcattaacttcccagtgactgattatacaagagatcttgaagaaatgcagaatgtt 483
Query: 421 tccagagaagaatacctggcgtctttacggcggaagagcagtggtttttcaagagggcta 480
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 484 tccagagaagaataccttgcgtctttacggcggaagagcagtggtttttcgagagggcta 543
Query: 481 tcaaaatatcgaggactctccagtcgatgggagacatcatatggccgtcttgcgggatca 540
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 544 tcaaaatatcgaggactctccagtcgatgggagacatcatatggccgtctggcggggtca 603
Query: 541 gattacttcagtagcatacattatggttcaggggatgattcagcagcagaaagtaaatat 600
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 604 gattacttcagtagtatacattatggtccaggggatgattcagcagcagaaagtaaatat 663
Query: 601 gtaagtggtttctgcctagaaagaaagattgatttaaccagttacctcaaatggtgggga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gtaagtggtttctgcctagaaagaaagattgatttaaccagttacctcaaatggtgggga 723
Query: 661 tctaacaagagtcgacaagctgacgctgggtcaagattatcagaagacaagaaacatggt 720
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 724 tctaacaagagtcgacaagctgacgctgggtcaagactatcagaagacaagaaacatggt 783
Query: 721 tttgctggagatatttgcagtgaacttaaaacattggaacagaaactccaacccacagaa 780
|||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||||||
Sbjct: 784 tttgctggagatgtttgcagcgaacttaaaacactggaacagaaagtccaacccacagaa 843
Query: 781 ccataccagatgccagagctaggaatgtcccacaatgacaaaaagcataaaagttcttca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 ccataccagatgccagagctaggaatgtcccacaatgacaaaaagcataaaagttcttca 903
Query: 841 gtctcggccttaagtatattgtcccgatctgctgcttacaagagcttgcaagagaaagcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 gtctcggccttaagtatattgtcccgatctgctgcttacaagagcttgcaagagaaagcg 963
Query: 901 tcaaagagacaggaaaat 918
||||||||||||||||||
Sbjct: 964 tcaaagagacaggaaaat 981
>gnl|LJGI|FS342341 homologue to UniRef100_Q6PQQ3 Cluster: AP2-like ethylene-responsive
transcription factor AINTEGUMENTA-LIKE 5; n=1;
Arabidopsis thaliana|Rep: AP2-like ethylene-responsive
transcription factor AINTEGUMENTA-LIKE 5 - Arabidopsis
thaliana (Mouse-ear cress), partial (11%)
Length = 723
Score = 81.8 bits (41), Expect = 1e-14
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 167 aacgcagctccatctaccgcggtgtcaccaggcatagatggactggtcgctatgaagcgc 226
|||||| ||||||||||||||| |||||||| |||||||||||||| | |||||||| |
Sbjct: 423 aacgcacctccatctaccgcggcgtcaccagacatagatggactgggagatatgaagctc 482
Query: 227 atctttgggataa 239
|||| ||||||||
Sbjct: 483 atctatgggataa 495
>gnl|LJGI|TC58976 homologue to UniRef100_A9JQY7 Cluster: AP2 protein; n=1; Elaeis
guineensis|Rep: AP2 protein - Elaeis guineensis var.
tenera (Oil palm), partial (42%)
Length = 1188
Score = 81.8 bits (41), Expect = 1e-14
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 167 aacgcagctccatctaccgcggtgtcaccaggcatagatggactggtcgctatgaagcgc 226
|||||| ||||||||||||||| |||||||| |||||||||||||| | |||||||| |
Sbjct: 583 aacgcacctccatctaccgcggcgtcaccagacatagatggactgggagatatgaagctc 642
Query: 227 atctttgggataa 239
|||| ||||||||
Sbjct: 643 atctatgggataa 655
>gnl|LJGI|DC595978 similar to UniRef100_A7PMN8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 554
Score = 58.0 bits (29), Expect = 1e-07
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 265 aagaaaggaaagcaagtttacttgggggcgtatgatgatgaggaagcggcggctagagcg 324
|||||||| |||||||||||| | ||||| |||||||| || ||| | || || |||||
Sbjct: 322 aagaaagggaagcaagtttaccttggggcttatgatgaagaagaatcagcagccagagca 381
Query: 325 tatgatcttgctgctctgaaatattgggg 353
|||||||| ||||| ||||| || |||||
Sbjct: 382 tatgatctagctgcactgaagtactgggg 410
>gnl|LJGI|TC75721 similar to UniRef100_Q94AN4 Cluster: AP2-like ethylene-responsive
transcription factor At1g16060; n=1; Arabidopsis
thaliana|Rep: AP2-like ethylene-responsive transcription
factor At1g16060 - Arabidopsis thaliana (Mouse-ear
cress), partial (57%)
Length = 1390
Score = 56.0 bits (28), Expect = 5e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 172 agctccatctaccgcggtgtcaccaggcatagatggactggtcgctatgaagcgcatctt 231
||||| |||| ||| |||||||| || ||| ||||||||||||||||||| || ||| |
Sbjct: 178 agctcaatcttccggggtgtcacaagacatcgatggactggtcgctatgaggctcattta 237
Query: 232 tgggataa 239
||||||||
Sbjct: 238 tgggataa 245