Miyakogusa Predicted Gene
- Lj1g3v4241080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4241080.1 CUFF.32130.1
(5682 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC600128 similar to UniRef100_Q2V410 Cluster: Uncharact... 714 0.0
gnl|LJGI|AI967642 similar to UniRef100_A7PWH4 Cluster: Chromosom... 523 e-147
gnl|LJGI|BP085862 similar to UniRef100_A7PWH4 Cluster: Chromosom... 323 7e-87
>gnl|LJGI|DC600128 similar to UniRef100_Q2V410 Cluster: Uncharacterized protein
At2g41700.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At2g41700.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (4%)
Length = 364
Score = 714 bits (360), Expect = 0.0
Identities = 363/364 (99%)
Strand = Plus / Plus
Query: 2604 tgaaagctatggtatatctgttacaactctggaggaggtattcttgagagttgcaggatc 2663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaaagctatggtatatctgttacaactctggaggaggtattcttgagagttgcaggatc 60
Query: 2664 tgactatgatgaagttgaatcctttaaagtaaatatccgatcccatatatcagattctgt 2723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgactatgatgaagttgaatcctttaaagtaaatatccgatcccatatatcagattctgt 120
Query: 2724 gccttctcttccttttagtgatcgtccatccacaaaaatatgtgaccttaaagttgttgg 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccttctcttccttttagtgatcgtccatccacaaaaatatgtgaccttaaagttgttgg 180
Query: 2784 aaattataagaagattcttggtttcgtgtctacaatggttggaagagcttttaatttaat 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaattataagaagattcttggtttcgtgtctacaatggttggaagagcttttaatttaat 240
Query: 2844 ttttgctacggttattagtttcatcaactttgtgagtatgcagtgttgtggctgttgtct 2903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttgctacggttattagtttcatcaactttgtgagtatgcagtgttgtggctgttgtct 300
Query: 2904 cattactaggtctacattctggaaacattctaaagctttattcattaaaagggcaatatc 2963
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 301 cattactaggtctacattctggaaacattctaaagctttattcattaaaggggcaatatc 360
Query: 2964 tgct 2967
||||
Sbjct: 361 tgct 364
>gnl|LJGI|AI967642 similar to UniRef100_A7PWH4 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 277
Score = 523 bits (264), Expect = e-147
Identities = 276/279 (98%), Gaps = 2/279 (0%)
Strand = Plus / Plus
Query: 4366 gtactttcaggttcccttgacaattccattatctacttgcgcaatcttcggaaggtatac 4425
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1 gtactttcaggttcccttgacatt--cattatctacttgcgcaatcttcggaaggtatac 58
Query: 4426 tccgaagagaagtatcatgggaaaaaggttgcagtagattcattaaccttctcagttcag 4485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 tccgaagagaagtatcatgggaaaaaggttgcagtagattcattaaccttctcagttcag 118
Query: 4486 gaaggagaatgttttggctttttagggacaaatggagctggaaagactacaactctttct 4545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gaaggagaatgttttggctttttagggacaaatggagctggaaagactacaactctttct 178
Query: 4546 atgctatgtggggaggaaactccttctgatgggactgcttttatttttggcaaagatata 4605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 atgctatgtggggaggaaactccttctgatgggactgcttttatttttggcaaagatata 238
Query: 4606 tgctcccatcccaaggctgctcgtcaatatattggatat 4644
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgctcccatcccaaggctgctcgtcaatatattggatat 277
>gnl|LJGI|BP085862 similar to UniRef100_A7PWH4 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 349
Score = 323 bits (163), Expect = 7e-87
Identities = 163/163 (100%)
Strand = Plus / Minus
Query: 5520 tggtttgagtattagataccagttaccatatgatgaagatttttccctggcagatgtttt 5579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tggtttgagtattagataccagttaccatatgatgaagatttttccctggcagatgtttt 290
Query: 5580 tggacttcttgaaggaaacagaaatagattagagattgcagagtacagcatcagccaatc 5639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tggacttcttgaaggaaacagaaatagattagagattgcagagtacagcatcagccaatc 230
Query: 5640 aactcttgagacgatatttaatcattttgcagctaattcatga 5682
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aactcttgagacgatatttaatcattttgcagctaattcatga 187