Miyakogusa Predicted Gene

Lj1g3v4237990.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4237990.3 Non Chatacterized Hit- tr|B3RMG9|B3RMG9_TRIAD
Putative uncharacterized protein OS=Trichoplax
adhaere,31.25,0.00000000003,tRNA_int_end_N2,tRNA-splicing
endonuclease, subunit Sen54, N-terminal,CUFF.32116.3
         (642 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64675 weakly similar to UniRef100_A7PWJ1 Cluster: Chr...  1239   0.0  

>gnl|LJGI|TC64675 weakly similar to UniRef100_A7PWJ1 Cluster: Chromosome chr8
           scaffold_34, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_34, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (36%)
          Length = 1303

 Score = 1239 bits (625), Expect = 0.0
 Identities = 641/646 (99%), Gaps = 4/646 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaatggctgaagtcattgagaagagtgggaaaatgtgggtaacaactggaatagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atgggaatggctgaagtcattgagaagagtgggaaaatgtgggtaacaactggaatagtt 345

                                                                       
Query: 61  cgcggtggcaagacttattcttcaattgaagagactttgta----tctcatggaactagg 116
           |||||||||||||||||||||||||||||||||||||||||    |||||||||||||||
Sbjct: 346 cgcggtggcaagacttattcttcaattgaagagactttgtaggtatctcatggaactagg 405

                                                                       
Query: 117 ggccttagatctctttgataatagtgatagaagtatatctctaatagaaatgtatgaaaa 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ggccttagatctctttgataatagtgatagaagtatatctctaatagaaatgtatgaaaa 465

                                                                       
Query: 177 ggttgctggcgggaagagtggatgttgttgggagctgtttgaggtttacaggcacctcaa 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ggttgctggcgggaagagtggatgttgttgggagctgtttgaggtttacaggcacctcaa 525

                                                                       
Query: 237 gtctcttggctacataattaggcggcatgatgttgcttggagtttgaagagtgttagaag 296
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 526 gtctcttggctacataattaggcggcatgatgttgctcggagtttgaagagtgttagaag 585

                                                                       
Query: 297 ttctcataatcctattgctcttgaagccacagaagaaagcagtcaactagaagaaatggg 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttctcataatcctattgctcttgaagccacagaagaaagcagtcaactagaagaaatggg 645

                                                                       
Query: 357 ttccaaagttgagctttgtatcaataagttatttggtgagttgaagattagtgatgtgaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ttccaaagttgagctttgtatcaataagttatttggtgagttgaagattagtgatgtgaa 705

                                                                       
Query: 417 gccagattttgatatttatcttccaaacagcaggtttagaaagtcttctcctggtgatcc 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gccagattttgatatttatcttccaaacagcaggtttagaaagtcttctcctggtgatcc 765

                                                                       
Query: 477 gaattttttgctgtacttgtccaggagtaatccaccatctagagcagaaattgaagccct 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gaattttttgctgtacttgtccaggagtaatccaccatctagagcagaaattgaagccct 825

                                                                       
Query: 537 tgagagacaatgtgatggcattcctttgaaaatctgcctggtcacagagggaagggtcag 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 tgagagacaatgtgatggcattcctttgaaaatctgcctggtcacagagggaagggtcag 885

                                                         
Query: 597 tttcttttcctttgacaaggttgaacttcctgttctaccatgaact 642
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 tttcttttcctttgacaaggttgaacttcctgttctaccatgaact 931