Miyakogusa Predicted Gene
- Lj1g3v4170190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4170190.1 Non Chatacterized Hit- tr|I3S6C0|I3S6C0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,Response_reg,Signal transduction response regulator,
receiver domain; RESPONSE_REGULATORY,Signal tra,CUFF.32032.1
(723 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57251 similar to UniRef100_A7QJJ8 Cluster: Chromosome... 1342 0.0
gnl|LJGI|TC66818 homologue to UniRef100_A7QJJ8 Cluster: Chromoso... 829 0.0
gnl|LJGI|BP068471 325 2e-88
gnl|LJGI|BP073830 similar to UniRef100_A7QJJ8 Cluster: Chromosom... 170 8e-42
gnl|LJGI|FS325795 similar to UniRef100_Q1RU46 Cluster: Response ... 103 1e-21
gnl|LJGI|TC57608 similar to UniRef100_Q1RU46 Cluster: Response r... 103 1e-21
gnl|LJGI|BW596855 similar to UniRef100_Q1RU46 Cluster: Response ... 62 5e-09
gnl|LJGI|TC69276 homologue to UniRef100_Q1RU46 Cluster: Response... 62 5e-09
gnl|LJGI|TC73157 similar to UniRef100_A7PD82 Cluster: Chromosome... 58 8e-08
gnl|LJGI|TC73362 homologue to UniRef100_Q1RU46 Cluster: Response... 52 5e-06
>gnl|LJGI|TC57251 similar to UniRef100_A7QJJ8 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (73%)
Length = 1047
Score = 1342 bits (677), Expect = 0.0
Identities = 708/723 (97%)
Strand = Plus / Plus
Query: 1 atggggatggctgctgcagagtcacagtaccatgttctggctgttgatgacagcatcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggggatggctgctgcagagtcacagtaccatgttctggctgttgatgacagcatcata 140
Query: 61 gatagaaagctcattgagaggcttcttaaaacctcttcctatcaagttactacagttgat 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 141 gatagaaagctcattgagaggctccttaaaacctcttcctatcaagttactacagttgat 200
Query: 121 tctggtagcaaggctttggagtttctgggtttgcatgaaaatgaagaaagtaacccaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggtagcaaggctttggagtttctgggtttgcatgaaaatgaagaaagtaacccaaat 260
Query: 181 acaccatctatttcacctaacaaccatcaggaagtggaggtgaatcttgttataacagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaccatctatttcacctaacaaccatcaggaagtggaggtgaatcttgttataacagac 320
Query: 241 tactgtatgcctggaatgacaggctatgatttgcttnnnnnnntcaaggaatcttcatct 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 tactgtatgcctggaatgacaggctatgatttgcttaaaaaaatcaaggaatcttcatct 380
Query: 301 ttgagaaacataccagtggtgattatgtcatctgagaatgtgccttcaaggattaacaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgagaaacataccagtggtgattatgtcatctgagaatgtgccttcaaggattaacaga 440
Query: 361 tgcttggaggaaggagcagaggaatttttcttgaagcctgtgaggcaatcagatttggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcttggaggaaggagcagaggaatttttcttgaagcctgtgaggcaatcagatttggtt 500
Query: 421 agactcaaatcccacatcaagaagaccaatttgnnnnnnnttcaaaatcaagatgtagca 480
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 agactcaaatcccacatcaagaagaccaatttgaaaaaaattcaaaatcaagatgtagca 560
Query: 481 gataagcttgaaattccagaagttcaacagcatcatcatcatcttccacagcaaatccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gataagcttgaaattccagaagttcaacagcatcatcatcatcttccacagcaaatccaa 620
Query: 541 aatgatcagcaacaagcaccaaagttccaatatctgcagccagagtcagaggtagatcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatgatcagcaacaagcaccaaagttccaatatctgcagccagagtcagaggtagatcaa 680
Query: 601 cagcaacaagcactacaacaagccaacaataacaagaggaagaccatggaacaagccaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagcaacaagcactacaacaagccaacaataacaagaggaagaccatggaacaagccaac 740
Query: 661 agtacacctgagactgacagaacaagaccaagatacagtggcatagctactgtggtatga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtacacctgagactgacagaacaagaccaagatacagtggcatagctactgtggtatga 800
Query: 721 tga 723
|||
Sbjct: 801 tga 803
>gnl|LJGI|TC66818 homologue to UniRef100_A7QJJ8 Cluster: Chromosome chr8
scaffold_106, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_106, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (62%)
Length = 878
Score = 829 bits (418), Expect = 0.0
Identities = 432/439 (98%)
Strand = Plus / Plus
Query: 1 atggggatggctgctgcagagtcacagtaccatgttctggctgttgatgacagcatcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atggggatggctgctgcagagtcacagtaccatgttctggctgttgatgacagcatcata 489
Query: 61 gatagaaagctcattgagaggcttcttaaaacctcttcctatcaagttactacagttgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gatagaaagctcattgagaggcttcttaaaacctcttcctatcaagttactacagttgat 549
Query: 121 tctggtagcaaggctttggagtttctgggtttgcatgaaaatgaagaaagtaacccaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tctggtagcaaggctttggagtttctgggtttgcatgaaaatgaagaaagtaacccaaat 609
Query: 181 acaccatctatttcacctaacaaccatcaggaagtggaggtgaatcttgttataacagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 acaccatctatttcacctaacaaccatcaggaagtggaggtgaatcttgttataacagac 669
Query: 241 tactgtatgcctggaatgacaggctatgatttgcttnnnnnnntcaaggaatcttcatct 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 670 tactgtatgcctggaatgacaggctatgatttgcttaaaaaaatcaaggaatcttcatct 729
Query: 301 ttgagaaacataccagtggtgattatgtcatctgagaatgtgccttcaaggattaacaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ttgagaaacataccagtggtgattatgtcatctgagaatgtgccttcaaggattaacaga 789
Query: 361 tgcttggaggaaggagcagaggaatttttcttgaagcctgtgaggcaatcagatttggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 tgcttggaggaaggagcagaggaatttttcttgaagcctgtgaggcaatcagatttggtt 849
Query: 421 agactcaaatcccacatca 439
|||||||||||||||||||
Sbjct: 850 agactcaaatcccacatca 868
>gnl|LJGI|BP068471
Length = 441
Score = 325 bits (164), Expect = 2e-88
Identities = 227/248 (91%)
Strand = Plus / Minus
Query: 476 tagcagataagcttgaaattccagaagttcaacagcatcatcatcatcttccacagcaaa 535
|||||||||||||||| |||||||||| |||||||||||| ||||||| |||||||| ||
Sbjct: 441 tagcagataagcttgagattccagaagctcaacagcatcagcatcatcgtccacagccaa 382
Query: 536 tccaaaatgatcagcaacaagcaccaaagttccaatatctgcagccagagtcagaggtag 595
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcccaaatgatcagcaaccagcaccaaagttccaatatctgcagccagagtcagaggtag 322
Query: 596 atcaacagcaacaagcactacaacaagccaacaataacaagaggaagaccatggaacaag 655
||||||||| ||||||||||| || |||| || || || ||||||||||||||||||| |
Sbjct: 321 atcaacagccacaagcactaccacgagcccaccatcaccagaggaagaccatggaacagg 262
Query: 656 ccaacagtacacctgagactgacagaacaagaccaagatacagtggcatagctactgtgg 715
|| |||||||||||||||||||||| || ||||| |||| ||||||||||||||||||||
Sbjct: 261 cccacagtacacctgagactgacagtaccagacccagatccagtggcatagctactgtgg 202
Query: 716 tatgatga 723
||||||||
Sbjct: 201 tatgatga 194
>gnl|LJGI|BP073830 similar to UniRef100_A7QJJ8 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 528
Score = 170 bits (86), Expect = 8e-42
Identities = 128/143 (89%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 261 aggctatgatttgcttnnnnnnntcaaggaatcttcatctttgagaaacataccagtggt 320
|||||||||||||||| |||||||||||||||| |||||| |||||||||||||
Sbjct: 476 aggctatgatttgcttaaggaaatcaaggaatcttcatccttgagatacataccagtggt 417
Query: 321 gattatgtcatctgagaatgtgccttcaaggattaacagatgcttggaggaaggagcaga 380
||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 416 gattaggtcatttgagaatgtgctttcaaggattaacaaatgcttggaggaaggagtaga 357
Query: 381 ggaat-ttttcttgaagcctgtg 402
||||| |||||||||||||||||
Sbjct: 356 ggaattttttcttgaagcctgtg 334
>gnl|LJGI|FS325795 similar to UniRef100_Q1RU46 Cluster: Response regulator receiver;
n=1; Medicago truncatula|Rep: Response regulator
receiver - Medicago truncatula (Barrel medic), partial
(81%)
Length = 798
Score = 103 bits (52), Expect = 1e-21
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 13 gctgcagagtcacagtaccatgttctggctgttgatgacagcatcatagatagaaagctc 72
||||||||| |||||| |||||| ||||||||||||| || | || || |||| | |
Sbjct: 304 gctgcagagacacagtttcatgttttggctgttgatgatagtcttattgacagaatgttg 363
Query: 73 attgagaggcttcttaaaacctcttcctatcaagttactacagttgattctggtagcaag 132
||||||||||| || ||||||||||| | ||| |||||| |||||||||||||||||| |
Sbjct: 364 attgagaggctcctcaaaacctcttcttttcatgttactgcagttgattctggtagcagg 423
Query: 133 gctttggagtttctgggtttgcatgaaaatga 164
|||||| ||||||| || |||| |||| ||||
Sbjct: 424 gctttgaagtttcttggcttgcttgaagatga 455
Score = 75.8 bits (38), Expect = 3e-13
Identities = 124/155 (80%)
Strand = Plus / Plus
Query: 232 ataacagactactgtatgcctggaatgacaggctatgatttgcttnnnnnnntcaaggaa 291
||||| || ||||||||||| |||||||||||||||||| || | ||||||||
Sbjct: 526 ataactgattactgtatgccaggaatgacaggctatgatctgttgagaaagatcaaggaa 585
Query: 292 tcttcatctttgagaaacataccagtggtgattatgtcatctgagaatgtgccttcaagg 351
||| |||| | | | |||||||| ||||||||||| || |||||||| || ||||||
Sbjct: 586 tctaaatctcttaaggatataccagttgtgattatgtcctcagagaatgtcccatcaagg 645
Query: 352 attaacagatgcttggaggaaggagcagaggaatt 386
|| ||||||||||| || |||||||| || |||||
Sbjct: 646 atcaacagatgcttagaagaaggagctgaagaatt 680
>gnl|LJGI|TC57608 similar to UniRef100_Q1RU46 Cluster: Response regulator receiver;
n=1; Medicago truncatula|Rep: Response regulator
receiver - Medicago truncatula (Barrel medic), partial
(81%)
Length = 885
Score = 103 bits (52), Expect = 1e-21
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 13 gctgcagagtcacagtaccatgttctggctgttgatgacagcatcatagatagaaagctc 72
||||||||| |||||| |||||| ||||||||||||| || | || || |||| | |
Sbjct: 196 gctgcagagacacagtttcatgttttggctgttgatgatagtcttattgacagaatgttg 255
Query: 73 attgagaggcttcttaaaacctcttcctatcaagttactacagttgattctggtagcaag 132
||||||||||| || ||||||||||| | ||| |||||| |||||||||||||||||| |
Sbjct: 256 attgagaggctcctcaaaacctcttcttttcatgttactgcagttgattctggtagcagg 315
Query: 133 gctttggagtttctgggtttgcatgaaaatga 164
|||||| ||||||| || |||| |||| ||||
Sbjct: 316 gctttgaagtttcttggcttgcttgaagatga 347
Score = 75.8 bits (38), Expect = 3e-13
Identities = 124/155 (80%)
Strand = Plus / Plus
Query: 232 ataacagactactgtatgcctggaatgacaggctatgatttgcttnnnnnnntcaaggaa 291
||||| || ||||||||||| |||||||||||||||||| || | ||||||||
Sbjct: 418 ataactgattactgtatgccaggaatgacaggctatgatctgttgagaaagatcaaggaa 477
Query: 292 tcttcatctttgagaaacataccagtggtgattatgtcatctgagaatgtgccttcaagg 351
||| |||| | | | |||||||| ||||||||||| || |||||||| || ||||||
Sbjct: 478 tctaaatctcttaaggatataccagttgtgattatgtcctcagagaatgtcccatcaagg 537
Query: 352 attaacagatgcttggaggaaggagcagaggaatt 386
|| ||||||||||| || |||||||| || |||||
Sbjct: 538 atcaacagatgcttagaagaaggagctgaagaatt 572
>gnl|LJGI|BW596855 similar to UniRef100_Q1RU46 Cluster: Response regulator receiver;
n=1; Medicago truncatula|Rep: Response regulator
receiver - Medicago truncatula (Barrel medic), partial
(27%)
Length = 483
Score = 61.9 bits (31), Expect = 5e-09
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 31 catgttctggctgttgatgacagcatcatagatagaaagctcattgagaggcttcttaaa 90
|||||| | |||||||||||||| | || ||||||| | | ||||||||||| || |||
Sbjct: 267 catgttttagctgttgatgacagtcttattgatagaatgttgattgagaggctcctcaaa 326
Query: 91 acctcttcctatcaagttactacagttgattctggtagcaaggcttt 137
|||||||||| ||| |||||| |||| || |||| || ||||||||
Sbjct: 327 acctcttcctttcatgttactgcagtggactctgccagtaaggcttt 373
>gnl|LJGI|TC69276 homologue to UniRef100_Q1RU46 Cluster: Response regulator receiver;
n=1; Medicago truncatula|Rep: Response regulator
receiver - Medicago truncatula (Barrel medic), partial
(88%)
Length = 903
Score = 61.9 bits (31), Expect = 5e-09
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 31 catgttctggctgttgatgacagcatcatagatagaaagctcattgagaggcttcttaaa 90
|||||| | |||||||||||||| | || ||||||| | | ||||||||||| || |||
Sbjct: 262 catgttttagctgttgatgacagtcttattgatagaatgttgattgagaggctcctcaaa 321
Query: 91 acctcttcctatcaagttactacagttgattctggtagcaaggcttt 137
|||||||||| ||| |||||| |||| || |||| || ||||||||
Sbjct: 322 acctcttcctttcatgttactgcagtggactctgccagtaaggcttt 368
>gnl|LJGI|TC73157 similar to UniRef100_A7PD82 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 846
Score = 58.0 bits (29), Expect = 8e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 361 tgcttggaggaaggagcagaggaatttttcttgaagcctgt 401
||||||||||||||||||||||| ||| | |||||||||||
Sbjct: 458 tgcttggaggaaggagcagaggattttctattgaagcctgt 498
>gnl|LJGI|TC73362 homologue to UniRef100_Q1RU46 Cluster: Response regulator receiver;
n=1; Medicago truncatula|Rep: Response regulator
receiver - Medicago truncatula (Barrel medic), partial
(50%)
Length = 498
Score = 52.0 bits (26), Expect = 5e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 31 catgttctggctgttgatgacagcatcatagatagaaagctcattgagaggcttcttaaa 90
|||||| | |||||||||||||| | || ||||||| | | ||||||||||| || |||
Sbjct: 196 catgttttagctgttgatgacagtcttattgatagaatgttgattgagaggctcctcaaa 255
Query: 91 acctcttcct 100
||||||||||
Sbjct: 256 acctcttcct 265