Miyakogusa Predicted Gene
- Lj1g3v4140620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4140620.1 Non Chatacterized Hit- tr|I1N8R7|I1N8R7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39952
PE,65.07,0,PREDICTED: HYPOTHETICAL PROTEIN,NULL; FAMILY NOT
NAMED,NULL; PPR,Pentatricopeptide repeat; PPR_3,Pen,CUFF.31993.1
(1836 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70664 weakly similar to UniRef100_Q9MQV2 Cluster: DNA... 1326 0.0
gnl|LJGI|TC77852 weakly similar to UniRef100_A7QJH1 Cluster: Chr... 529 e-149
gnl|LJGI|AV779508 UniRef100_A0ZAL8 Cluster: Photosystem I assemb... 434 e-121
gnl|LJGI|TC61255 similar to UniRef100_A7QJH1 Cluster: Chromosome... 141 2e-32
>gnl|LJGI|TC70664 weakly similar to UniRef100_Q9MQV2 Cluster: DNA-binding protein;
n=1; Triticum aestivum|Rep: DNA-binding protein -
Triticum aestivum (Wheat), partial (9%)
Length = 757
Score = 1326 bits (669), Expect = 0.0
Identities = 672/673 (99%)
Strand = Plus / Plus
Query: 1 atgttggctcttcgtcgagcttctctccctctcaggaaaagagggtttaatgttagggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atgttggctcttcgtcgagcttctctccctctcaggaaaagagggtttaatgttagggtt 144
Query: 61 tcatgtgccaaattaacatcaaccactgtagaagacaaagctgagtcctatccaacgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tcatgtgccaaattaacatcaaccactgtagaagacaaagctgagtcctatccaacgatt 204
Query: 121 catgctagtgttggtgtgtttcatccttcactgaatgctagtttccattctttgaaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 catgctagtgttggtgtgtttcatccttcactgaatgctagtttccattctttgaaattc 264
Query: 181 aatgtgtgtggttcacgtcacctttcgtcgaatgccggtgcgagtagcaccaaaggcgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 aatgtgtgtggttcacgtcacctttcgtcgaatgccggtgcgagtagcaccaaagacgac 324
Query: 241 gaggatgatgatgagttttctgaactggagagtccggttgctgctggtggggatgaggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaggatgatgatgagttttctgaactggagagtccggttgctgctggtggggatgaggat 384
Query: 301 gatctgttgagttctgataatgaatcggagggtggtgaggaaccgcacgatgagctggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatctgttgagttctgataatgaatcggagggtggtgaggaaccgcacgatgagctggag 444
Query: 361 ttgtctgatggcgagactggtgaaccggctgagaagaagaaagcgtaccggaaaaggatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgtctgatggcgagactggtgaaccggctgagaagaagaaagcgtaccggaaaaggatt 504
Query: 421 gagtcggaactgtgtaataagattatggatgctccggggatggccattcatacggctctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagtcggaactgtgtaataagattatggatgctccggggatggccattcatacggctctg 564
Query: 481 gataagtgggttgaagaagggaaagaaatgagcagacaagagatctctcaggccatattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gataagtgggttgaagaagggaaagaaatgagcagacaagagatctctcaggccatattt 624
Query: 541 cttcttcgcaagcgtaatatgtacgggagagctttgcagctctcagagtggctcgagtca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cttcttcgcaagcgtaatatgtacgggagagctttgcagctctcagagtggctcgagtca 684
Query: 601 aaaaagcagattgaatttattgaaagggattatgcttctcgagttgatttaattgccaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaaaagcagattgaatttattgaaagggattatgcttctcgagttgatttaattgccaaa 744
Query: 661 attcatggcctac 673
|||||||||||||
Sbjct: 745 attcatggcctac 757
>gnl|LJGI|TC77852 weakly similar to UniRef100_A7QJH1 Cluster: Chromosome chr8
scaffold_106, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_106, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 492
Score = 529 bits (267), Expect = e-149
Identities = 267/267 (100%)
Strand = Plus / Plus
Query: 1570 attgctatcttggagcagtattctaagaggggcgacatccataattcagaaaagattttc 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgctatcttggagcagtattctaagaggggcgacatccataattcagaaaagattttc 60
Query: 1630 tacagaatgaaacaagctggttatacatcgcgaataaggcagtaccaggttctactacag 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacagaatgaaacaagctggttatacatcgcgaataaggcagtaccaggttctactacag 120
Query: 1690 gcctatataaaggccaagcttccagcctatggaattagagacagattgaaaggtgataat 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcctatataaaggccaagcttccagcctatggaattagagacagattgaaaggtgataat 180
Query: 1750 atatatccaaacagaaatttggccaccttgttggctcaagttgatggattcaggaagact 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atatatccaaacagaaatttggccaccttgttggctcaagttgatggattcaggaagact 240
Query: 1810 cctgtttctgatttgcttgattgagag 1836
|||||||||||||||||||||||||||
Sbjct: 241 cctgtttctgatttgcttgattgagag 267
>gnl|LJGI|AV779508 UniRef100_A0ZAL8 Cluster: Photosystem I assembly protein Ycf3; n=1;
Nodularia spumigena CCY 9414|Rep: Photosystem I assembly
protein Ycf3 - Nodularia spumigena CCY 9414, partial
(13%)
Length = 431
Score = 434 bits (219), Expect = e-121
Identities = 307/335 (91%), Gaps = 1/335 (0%)
Strand = Plus / Minus
Query: 1503 ctctattcttcagaaggcaactcagcagagccatgccaaccaggtgaagccactattttc 1562
||||||| |||||||||| ||||||| |||||||||| |||||||||| ||||||||||
Sbjct: 431 ctctatttttcagaaggcgactcagccgagccatgcccaccaggtgaacccactattttt 372
Query: 1563 ttcctatattgctatcttggagcagtattctaagaggggcgacatccataattc-agaaa 1621
||||||||||||||||||||| | | ||||||||||||||||||||||||| || |||||
Sbjct: 371 ttcctatattgctatcttggacccggattctaagaggggcgacatccataaatccagaaa 312
Query: 1622 agattttctacagaatgaaacaagctggttatacatcgcgaataaggcagtaccaggttc 1681
||||||||||| | ||||||| |||||||||||||||||| ||||||||||||| |||||
Sbjct: 311 agattttctaccgcatgaaaccagctggttatacatcgcgcataaggcagtacccggttc 252
Query: 1682 tactacaggcctatataaaggccaagcttccagcctatggaattagagacagattgaaag 1741
|| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 251 tagttcaggcctatataaaggccaagcttcccgcctatggaattagagacagactgaaag 192
Query: 1742 gtgataatatatatccaaacagaaatttggccaccttgttggctcaagttgatggattca 1801
|||||||||||||||| ||| | |||||||| || | |||||||||||||||||||||
Sbjct: 191 gtgataatatatatcccaacccacatttggcccccctcctggctcaagttgatggattca 132
Query: 1802 ggaagactcctgtttctgatttgcttgattgagag 1836
|||||||||||||||||||||||||||||||||||
Sbjct: 131 ggaagactcctgtttctgatttgcttgattgagag 97
>gnl|LJGI|TC61255 similar to UniRef100_A7QJH1 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 878
Score = 141 bits (71), Expect = 2e-32
Identities = 209/255 (81%)
Strand = Plus / Plus
Query: 1580 tggagcagtattctaagaggggcgacatccataattcagaaaagattttctacagaatga 1639
||||||||||| | |||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 489 tggagcagtatgcaaagaggggtgatgtccataattcagaaaagattttccacagaatga 548
Query: 1640 aacaagctggttatacatcgcgaataaggcagtaccaggttctactacaggcctatataa 1699
||||||||||||||| || ||||| | | || || ||||| |||||||||||||||
Sbjct: 549 gacaagctggttatacttctcgaattactccgtttcaagttctggtacaggcctatataa 608
Query: 1700 aggccaagcttccagcctatggaattagagacagattgaaaggtgataatatatatccaa 1759
| |||||| ||||||| ||||| || || |||||| |||||| |||||| | | ||| |
Sbjct: 609 aagccaaggttccagcatatgggatcagggacagaatgaaagctgataacgtgtttccca 668
Query: 1760 acagaaatttggccaccttgttggctcaagttgatggattcaggaagactcctgtttctg 1819
||| | |||||| | ||||||||||||||||| ||| | ||| ||| | ||||| |
Sbjct: 669 acaatactttggctaaacagttggctcaagttgatgcatttaagaaaactgcagtttccg 728
Query: 1820 atttgcttgattgag 1834
|||||||||||||||
Sbjct: 729 atttgcttgattgag 743
Score = 97.6 bits (49), Expect = 2e-19
Identities = 116/137 (84%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 1366 tatgcaaatcataagatgctaatgaagggtaaggatcttgttaagcgaatggcggatagt 1425
|||||||||||||||||||||| |||||||||||||||| || ||||||||| || | |
Sbjct: 285 tatgcaaatcataagatgctaaagaagggtaaggatcttattcagcgaatgggagaaaat 344
Query: 1426 gggtgccgaataggtccattgacatgggatgcaattgtgaaactttatgtcgaggctggg 1485
|||||| ||||| |||||||| |||||| | |||||||||||||| | | || |||
Sbjct: 345 gggtgcaagatagg-ccattgacctgggattcgcttgtgaaactttatacccaagcaggg 403
Query: 1486 gaagtggagaaggcaga 1502
||||| |||||||||||
Sbjct: 404 gaagttgagaaggcaga 420