Miyakogusa Predicted Gene
- Lj1g3v4139590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4139590.1 Non Chatacterized Hit- tr|J3MHX7|J3MHX7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB07G1,42.38,1e-16,seg,NULL,CUFF.32121.1
(1422 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72699 similar to UniRef100_A8IPW4 Cluster: Predicted ... 1168 0.0
gnl|LJGI|TC71190 similar to UniRef100_A7PIC6 Cluster: Chromosome... 965 0.0
>gnl|LJGI|TC72699 similar to UniRef100_A8IPW4 Cluster: Predicted protein; n=1;
Chlamydomonas reinhardtii|Rep: Predicted protein -
Chlamydomonas reinhardtii, partial (5%)
Length = 600
Score = 1168 bits (589), Expect = 0.0
Identities = 589/589 (100%)
Strand = Plus / Plus
Query: 332 acaggattgctgcccgggagaagattaagcgccgtggtgacagttatcagccagcaattg 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 acaggattgctgcccgggagaagattaagcgccgtggtgacagttatcagccagcaattg 71
Query: 392 acaacttggcaaatgattcagcatacatgttgaatttgtcttcagcttctgatctggaca 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 acaacttggcaaatgattcagcatacatgttgaatttgtcttcagcttctgatctggaca 131
Query: 452 aatctgcagaagttgctaaatctcttaccttttcttcaggttttctgggatcacatggaa 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aatctgcagaagttgctaaatctcttaccttttcttcaggttttctgggatcacatggaa 191
Query: 512 atcttacggttccttcaagtcttgggtcgggtgggaaatttcctgccctggtgtcacctc 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atcttacggttccttcaagtcttgggtcgggtgggaaatttcctgccctggtgtcacctc 251
Query: 572 ttttttctccctactattgttggtgtccgcctgagatttctgcacttccatccatttcag 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttttttctccctactattgttggtgtccgcctgagatttctgcacttccatccatttcag 311
Query: 632 cacttccacaatcttcccactcatctgctgaatcactgcctctgccctcaggtgcctctt 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cacttccacaatcttcccactcatctgctgaatcactgcctctgccctcaggtgcctctt 371
Query: 692 tattacccaacactgtctcagctaggctgttggaaccagtgcagcctcttaatcttagta 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tattacccaacactgtctcagctaggctgttggaaccagtgcagcctcttaatcttagta 431
Query: 752 cctctatggactttcctccatttctcccggacttccctccatttctccccgatccattgg 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cctctatggactttcctccatttctcccggacttccctccatttctccccgatccattgg 491
Query: 812 tcagaatgtctttgccaacttcgcagcagattcccactttcacacaattaatgtgtgatc 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tcagaatgtctttgccaacttcgcagcagattcccactttcacacaattaatgtgtgatc 551
Query: 872 cattggtcagaatgtcattgccaacttcgcagcagattcccactttcac 920
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cattggtcagaatgtcattgccaacttcgcagcagattcccactttcac 600
Score = 119 bits (60), Expect = 5e-26
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 868 gatccattggtcagaatgtcattgccaacttcgcagcagattcccactttcactccatta 927
|||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||
Sbjct: 482 gatccattggtcagaatgtctttgccaacttcgcagcagattcccactttcacacaatta 541
Query: 928 atgtgtgatcca 939
||||||||||||
Sbjct: 542 atgtgtgatcca 553
>gnl|LJGI|TC71190 similar to UniRef100_A7PIC6 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 711
Score = 965 bits (487), Expect = 0.0
Identities = 487/487 (100%)
Strand = Plus / Plus
Query: 936 tccaattgtacacgtcccagttattgatgtgtgttcttcaggccagggctatctcgtgag 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tccaattgtacacgtcccagttattgatgtgtgttcttcaggccagggctatctcgtgag 64
Query: 996 tgctggtggccctgcgatgtcaactagcattccaccattgcatcccaagcttgtgaaccc 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tgctggtggccctgcgatgtcaactagcattccaccattgcatcccaagcttgtgaaccc 124
Query: 1056 attgattcctgaatctgatgctgtggtaaagggtgcacgagagacactaaggatgctgct 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 attgattcctgaatctgatgctgtggtaaagggtgcacgagagacactaaggatgctgct 184
Query: 1116 tagcggttcaagccagggggcggtgatggatcctttgcctgcaatcttaactagtccaga 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tagcggttcaagccagggggcggtgatggatcctttgcctgcaatcttaactagtccaga 244
Query: 1176 tgacaatcggaatgtacttgttaccggcagccgtggtctttacacaggaaccagggatat 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgacaatcggaatgtacttgttaccggcagccgtggtctttacacaggaaccagggatat 304
Query: 1236 caatgttattgcaaacagcattgctgccatgggatttgtatcacagatatccaatgggga 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 caatgttattgcaaacagcattgctgccatgggatttgtatcacagatatccaatgggga 364
Query: 1296 caatgaaggtgattcggaggtatgtggcaactacgggattatgggaacattcatgaatcc 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 caatgaaggtgattcggaggtatgtggcaactacgggattatgggaacattcatgaatcc 424
Query: 1356 caatgattcaggtggtgcccttacggatgacgagggcgggccttcctttaattccaagta 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 caatgattcaggtggtgcccttacggatgacgagggcgggccttcctttaattccaagta 484
Query: 1416 ccactaa 1422
|||||||
Sbjct: 485 ccactaa 491