Miyakogusa Predicted Gene
- Lj1g3v4139580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4139580.1 Non Chatacterized Hit- tr|C3ZEV0|C3ZEV0_BRAFL
Putative uncharacterized protein OS=Branchiostoma
flor,34.97,1e-18,SPC25,Signal peptidase complex subunit 2; SUBFAMILY
NOT NAMED,NULL; MICROSOMAL SIGNAL PEPTIDASE 25 K,CUFF.31988.1
(555 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57242 similar to UniRef100_Q6NQE4 Cluster: At4g04200;... 1100 0.0
gnl|LJGI|TC78337 weakly similar to UniRef100_Q6NQE4 Cluster: At4... 615 e-175
gnl|LJGI|BP046396 similar to UniRef100_A7PIC5 Cluster: Chromosom... 462 e-129
>gnl|LJGI|TC57242 similar to UniRef100_Q6NQE4 Cluster: At4g04200; n=1; Arabidopsis
thaliana|Rep: At4g04200 - Arabidopsis thaliana
(Mouse-ear cress), partial (91%)
Length = 877
Score = 1100 bits (555), Expect = 0.0
Identities = 555/555 (100%)
Strand = Plus / Plus
Query: 1 atggcgtccaaatctctaaagaaagccaatctcctcgatcacaactccatcaagcacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atggcgtccaaatctctaaagaaagccaatctcctcgatcacaactccatcaagcacatc 158
Query: 61 ctcgacgagtctgtctctgagattgtaacgagtcgtgggtatgtggaagatgtgagattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ctcgacgagtctgtctctgagattgtaacgagtcgtgggtatgtggaagatgtgagattg 218
Query: 121 agcaacgtgaggcttttggttgggactgtcatcattgtcattgctctctttgctcaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 agcaacgtgaggcttttggttgggactgtcatcattgtcattgctctctttgctcaattc 278
Query: 181 tacaagaagaagttccctgagaatcgggattttctccttgcctgcatcgccttgtatgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tacaagaagaagttccctgagaatcgggattttctccttgcctgcatcgccttgtatgtg 338
Query: 241 atcttcaatggggtgttgcagctgatcatatacactaaggagaaaaatgccattctgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 atcttcaatggggtgttgcagctgatcatatacactaaggagaaaaatgccattctgttt 398
Query: 301 acttatcctcctgctggatcctttaccagtactggtttggtagtttcctccaaactgcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 acttatcctcctgctggatcctttaccagtactggtttggtagtttcctccaaactgcct 458
Query: 361 aggttttctgacatgtacacacttaccatagcaagtgctgatccaaaatcaatttctgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aggttttctgacatgtacacacttaccatagcaagtgctgatccaaaatcaatttctgca 518
Query: 421 aatgagcctaagcatttaactaaaagtgttactcagtggttcaccaaggatggagtctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aatgagcctaagcatttaactaaaagtgttactcagtggttcaccaaggatggagtctta 578
Query: 481 gttgagggcctcttttggaaggatgttgaagctctgatagctcaatatacgaaagaacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gttgagggcctcttttggaaggatgttgaagctctgatagctcaatatacgaaagaacca 638
Query: 541 aagaagagtaagtga 555
|||||||||||||||
Sbjct: 639 aagaagagtaagtga 653
>gnl|LJGI|TC78337 weakly similar to UniRef100_Q6NQE4 Cluster: At4g04200; n=1;
Arabidopsis thaliana|Rep: At4g04200 - Arabidopsis
thaliana (Mouse-ear cress), partial (90%)
Length = 779
Score = 615 bits (310), Expect = e-175
Identities = 494/555 (89%), Gaps = 9/555 (1%)
Strand = Plus / Plus
Query: 1 atggcgtccaaatctctaaagaaagccaatctcctcgatcacaactccatcaagcacatc 60
||||||||||| |||| |||||| |||| ||| | |||||||||||||||||||||||
Sbjct: 72 atggcgtccaagtctccgaagaaaaccaacctcttagatcacaactccatcaagcacatt 131
Query: 61 ctcgacgagtctgtctctgagattgtaacgagtcgtgggtatgtggaagatgtgagattg 120
||||||||||||||||||||||| || | |||| |||||||||||||||||||||||||
Sbjct: 132 ctcgacgagtctgtctctgagatagtgaagagtaatgggtatgtggaagatgtgagattg 191
Query: 121 agcaacgtgaggcttttggttgggactgtcatcattgtcattgctctctttgctcaattc 180
||||||||||| || ||| ||||| |||||||||| |||||||||||||| |||| ||
Sbjct: 192 agcaacgtgagactgttgattggggctgtcatcatcgtcattgctctcttctctcagttt 251
Query: 181 tacaagaagaagttccctgagaatcgggattttctccttgcctgcatcgccttgtatgtg 240
||||||||||||||||| |||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 252 tacaagaagaagttccccgagaataaggattttgtccttgcctgcatcgctttgtatgta 311
Query: 241 atcttcaatggggtgttgcagctgatcatatacactaaggagaaaaatgccattctgttt 300
|||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||||
Sbjct: 312 atcttcaatgggttgttgcagctgatcatatacactaaggagaaagatgctatactgttt 371
Query: 301 acttatcctcctgctggatcctttaccagtactggtttggtagtttcctccaaactgcct 360
||||||||||||||||||| || |||| ||||||||||||||||||||| |||||
Sbjct: 372 acttatcctcctgctggat------ccggtaccggtttggtagtttcctccaaattgcct 425
Query: 361 aggttttctgacatgtacacacttaccatagcaagtgctgatccaaaatcaatttctgca 420
|| |||| |||||||||||| ||||||||||||||||| || ||||||||||||||| ||
Sbjct: 426 agattttttgacatgtacacgcttaccatagcaagtgcagagccaaaatcaatttctaca 485
Query: 421 aatgagcctaagcatttaactaaaagtgttactcagtggttcaccaaggatggagtctta 480
||||| || ||||| ||||||||||||||||||||||||||||| || ||| |||||
Sbjct: 486 aatgaaccagtacattttactaaaagtgttactcagtggttcaccaacgacggaatctta 545
Query: 481 gttgagggcctcttttggaaggatgttgaagctctgatagctcaatatacgaaagaacca 540
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 546 gttgagggcctcttttggaaggatgttgaagcactgatagctcaatatacga---aacca 602
Query: 541 aagaagagtaagtga 555
|||||||| ||||||
Sbjct: 603 aagaagagcaagtga 617
>gnl|LJGI|BP046396 similar to UniRef100_A7PIC5 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 553
Score = 462 bits (233), Expect = e-129
Identities = 233/233 (100%)
Strand = Plus / Plus
Query: 1 atggcgtccaaatctctaaagaaagccaatctcctcgatcacaactccatcaagcacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atggcgtccaaatctctaaagaaagccaatctcctcgatcacaactccatcaagcacatc 106
Query: 61 ctcgacgagtctgtctctgagattgtaacgagtcgtgggtatgtggaagatgtgagattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ctcgacgagtctgtctctgagattgtaacgagtcgtgggtatgtggaagatgtgagattg 166
Query: 121 agcaacgtgaggcttttggttgggactgtcatcattgtcattgctctctttgctcaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 agcaacgtgaggcttttggttgggactgtcatcattgtcattgctctctttgctcaattc 226
Query: 181 tacaagaagaagttccctgagaatcgggattttctccttgcctgcatcgcctt 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tacaagaagaagttccctgagaatcgggattttctccttgcctgcatcgcctt 279
Score = 89.7 bits (45), Expect = 2e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 234 gtatgtgatcttcaatggggtgttgcagctgatcatatacactaa 278
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gtatgtgatcttcaatggggtgttgcagctgatcatatacactaa 553