Miyakogusa Predicted Gene
- Lj1g3v4139390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4139390.1 tr|G7KBV7|G7KBV7_MEDTR Glucan
endo-1,3-beta-glucosidase OS=Medicago truncatula GN=MTR_5g081720 PE=3
,73.84,0,Glyco_hydro_17,Glycoside hydrolase, family 17; no
description,Glycoside hydrolase, catalytic domain;,CUFF.31973.1
(1129 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75185 weakly similar to UniRef100_Q6L4B5 Cluster: Gly... 452 e-126
gnl|LJGI|BP069771 weakly similar to UniRef100_A7PID1 Cluster: Ch... 406 e-112
gnl|LJGI|DC595052 236 2e-61
gnl|LJGI|TC67137 similar to UniRef100_A7NX09 Cluster: Chromosome... 236 2e-61
>gnl|LJGI|TC75185 weakly similar to UniRef100_Q6L4B5 Cluster: Glycosyl hydrolases
family 17 protein; n=1; Solanum demissum|Rep: Glycosyl
hydrolases family 17 protein - Solanum demissum (Wild
potato), partial (12%)
Length = 491
Score = 452 bits (228), Expect = e-126
Identities = 338/376 (89%), Gaps = 9/376 (2%)
Strand = Plus / Plus
Query: 80 caaccaccgcctctctcggcgtcacctactccaacaaccgccaacaacccccacctccag 139
|||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 caacaaccgcctctctcggcgtcacctactccaacaaccgccaacaacc---------ag 171
Query: 140 accacatcaccaccgcactccaaaccctcaaactcacctccatccgcctcgaagaacctg 199
||| |||| || ||||| | |||||||||||||||||||||||||||||| ||||||| |
Sbjct: 172 accgcatcgccgccgcaatgcaaaccctcaaactcacctccatccgcctcaaagaacccg 231
Query: 200 acccatccatcatgcgctccctcctctactccaacatctccatcttcctcaccgtcccca 259
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 232 acccagccatcatgcgctcccttctctactccaacatctccatcttcctcaccgtcccca 291
Query: 260 actacatcgtcacctccttcgccaacaaccgctccaccgcacgcgcctggctctacaccc 319
|| |||| ||||| ||| | ||||| |||| ||||||||||||||||||| |||||||||
Sbjct: 292 accacatggtcacttccatggccaataacctctccaccgcacgcgcctggatctacaccc 351
Query: 320 acgtcgtcccgtactacccacgcgccaagatcaccaccatctccgtcggtaacgccttca 379
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 352 acgtcgtcccgtactacccacgcgccaagatcaccaccatctccgttggcaacgccttca 411
Query: 380 ccgatgtctaccctaacgccgccgataatctcctcccggcgatctccaatatccagatct 439
||||||||||||| | |||||| |||| ||||||| ||| ||||||||||||||| |||
Sbjct: 412 tcgatgtctaccctcaggccgccaataacctcctcctggctatctccaatatccaggtct 471
Query: 440 ccctccgcgacctcgg 455
||||||| ||||||||
Sbjct: 472 ccctccgtgacctcgg 487
>gnl|LJGI|BP069771 weakly similar to UniRef100_A7PID1 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 529
Score = 406 bits (205), Expect = e-112
Identities = 337/381 (88%)
Strand = Plus / Minus
Query: 737 tcgacatgatggtcgacgctgttgcctccgccatggccgtcgctgggtacgagacgattc 796
||||||||||||||||||| || ||||| |||||||||| ||||||||||| || || |
Sbjct: 529 tcgacatgatggtcgacgccgtcgcctctgccatggccgaggctgggtacgaaacaatcc 470
Query: 797 cgattatcgtgacggagactgggtggccgagctccggcgccggcgatgagtttgatgcga 856
| || | || || ||||| |||||||||||||||| ||||| ||| ||||| | ||||
Sbjct: 469 caatcgttgtcactgagacagggtggccgagctccgacgccgccgacgagttcaacgcga 410
Query: 857 atttggggtatgctgagacctatttgaggggtttggtgaatcatctgagttctgggtcgg 916
|||||||||| || |||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 409 atttggggtacgccgagacctatttgaggggtttggtgaatcatctgagttcaggaaccg 350
Query: 917 gaacgcctctgttgaaagatggggttcgagaggtttatgtgtacgagctttttgacaggg 976
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 349 gaacgcctctgttgaaagatggggttcaacaggtttatgtgtacgagctttttgacagga 290
Query: 977 aaggagcaacaacgggtcgtgattgggggcttctgaacccgaatggtactgccaagtacc 1036
||||| ||||||||||||| ||||||||| ||||| |||| ||||| || || |||||||
Sbjct: 289 aaggaacaacaacgggtcgcgattgggggattctgtaccctaatggcacagctaagtacc 230
Query: 1037 acgttgatttctctgctgcttcatcaggttcttccattacagtggctctggtaattttct 1096
|||||||||||||||||| ||||||| ||||||||||||| |||||| |||| |||||||
Sbjct: 229 acgttgatttctctgctgtttcatcacgttcttccattactgtggctttggtgattttct 170
Query: 1097 ggattctggttcagttggtct 1117
|| ||||||||||||||||||
Sbjct: 169 ggcttctggttcagttggtct 149
>gnl|LJGI|DC595052
Length = 382
Score = 236 bits (119), Expect = 2e-61
Identities = 201/230 (87%), Gaps = 9/230 (3%)
Strand = Plus / Plus
Query: 80 caaccaccgcctctctcggcgtcacctactccaacaaccgccaacaacccccacctccag 139
||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 162 caancaccgcctctctcggcgtcacctactccaacaaccgccaacaacc---------ag 212
Query: 140 accacatcaccaccgcactccaaaccctcaaactcacctccatccgcctcgaagaacctg 199
||| |||| || ||||| | |||||||||||||||||||||||||||||| |||| || |
Sbjct: 213 accgcatcgccgccgcaatgcaaaccctcaaactcacctccatccgcctcaaagagcccg 272
Query: 200 acccatccatcatgcgctccctcctctactccaacatctccatcttcctcaccgtcccca 259
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 273 acccagccatcatgcgctcccttctctactccaacatctccatcttcctcaccgtcccca 332
Query: 260 actacatcgtcacctccttcgccaacaaccgctccaccgcacgcgcctgg 309
|| |||| ||||| ||| | | | | |||| |||||||||||||||||||
Sbjct: 333 accacatggtcacttccatggacgataacctctccaccgcacgcgcctgg 382
>gnl|LJGI|TC67137 similar to UniRef100_A7NX09 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; core
eudicotyledons|Rep: Chromosome chr5 scaffold_2, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 813
Score = 236 bits (119), Expect = 2e-61
Identities = 170/187 (90%)
Strand = Plus / Plus
Query: 928 ttgaaagatggggttcgagaggtttatgtgtacgagctttttgacagggaaggagcaaca 987
|||||||||||| || || |||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 178 ttgaaagatgggttttgacaggtttatttgtacgagctttttgacagggatggaacaaca 237
Query: 988 acgggtcgtgattgggggcttctgaacccgaatggtactgccaagtaccacgttgatttc 1047
|||||||| |||||| ||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 238 acgggtcgcgattggaggcttctgaaccctaatggcaccgccaagtaccacgttgatttc 297
Query: 1048 tctgctgcttcatcaggttcttccattacagtggctctggtaattttctggattctggtt 1107
||||| ||||||||||||||||||||| |||||| |||||||||||||| ||||||||
Sbjct: 298 tctgccgcttcatcaggttcttccatttgcgtggctttggtaattttctggcttctggtt 357
Query: 1108 cagttgg 1114
|||||||
Sbjct: 358 cagttgg 364