Miyakogusa Predicted Gene

Lj1g3v4118240.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4118240.1 tr|Q2HSY4|Q2HSY4_MEDTR Cyclin-like F-box
OS=Medicago truncatula GN=MtrDRAFT_AC150889g18v2 PE=4
SV=1,37.82,6e-19,FBOX,F-box domain, cyclin-like; no description,NULL;
F-box,F-box domain, cyclin-like; A Receptor for,CUFF.31985.1
         (504 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024643 weakly similar to UniRef100_Q2HSX6 Cluster: Cy...   232   2e-60

>gnl|LJGI|GO024643 weakly similar to UniRef100_Q2HSX6 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (49%)
          Length = 631

 Score =  232 bits (117), Expect = 2e-60
 Identities = 185/207 (89%), Gaps = 3/207 (1%)
 Strand = Plus / Plus

                                                                       
Query: 36  tctcttgaatcttcctgaactcattcttgattgcatcctcaaacgcctctcaccaatgga 95
           |||||||||| | ||||||| |||||| |||||||||||||||| |||||||||||| ||
Sbjct: 53  tctcttgaatttgcctgaacccattctggattgcatcctcaaactcctctcaccaatcga 112

                                                                       
Query: 96  gctcatcaaaatgtccgaggtgtgcacttgtttaagggatgcatgtagaagcgatcatct 155
           ||||||||||||||||  |||||||||||||||||||||||||||| |||| |||||| |
Sbjct: 113 gctcatcaaaatgtccatggtgtgcacttgtttaagggatgcatgtcgaagtgatcattt 172

                                                                       
Query: 156 gtgggaaaacctcatcaaccagaaatggggtagaatcattaatggtgagtctactttcaa 215
           ||||||||||| |||||||||||||||||||| |||| |   |||||| | | |||||||
Sbjct: 173 gtgggaaaaccacatcaaccagaaatggggtacaatcgt---tggtgattttgctttcaa 229

                                      
Query: 216 agagtggcaatggcacctaacaaaatt 242
           ||||||||||||||||  |||||||||
Sbjct: 230 agagtggcaatggcactcaacaaaatt 256